RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 CREBL2O60519 120 aaPredicted RBP16.74■□□□□ 0.27
SHISA4-201ENST00000362011 PROP1O75360 226 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 ANXA3P12429 323 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 F2RP25116 425 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 SLC9A3R2Q15599 337 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 PDZD9Q8IXQ8 264 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 OR51H1Q8NH63 302 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 ST6GALNAC6Q969X2 333 aa16.74■□□□□ 0.27
SHISA4-201ENST00000362011 LIN7CQ9NUP9 197 aaKnown RBP16.74■□□□□ 0.27
SHISA4-201ENST00000362011 ABCA1O95477 2261 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 A0A1W2PRD5 423 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 A0A1W2PRF3 423 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 A0A1W2PRM7 423 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 IFNA2P01563 188 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 HTR1DP28221 377 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 DUTP33316 252 aaKnown RBP16.73■□□□□ 0.27
SHISA4-201ENST00000362011 THBS3P49746 956 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 LGALS4P56470 323 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 C1orf229Q6ZS94 237 aaPredicted RBP16.73■□□□□ 0.27
SHISA4-201ENST00000362011 CASTOR1Q8WTX7 329 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 TCTEX1D2Q8WW35 142 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 GALNT14Q96FL9 552 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 ADTRPQ96IZ2 230 aa16.73■□□□□ 0.27
SHISA4-201ENST00000362011 TRAV40A0A0B4J280 105 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 CENPVL3A0A0U1RRI6 287 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 VGLL3A8MV65 326 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 H0Y980 276 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 CD5LO43866 347 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 B3GALNT1O75752 331 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 OR5AC1P0C628 307 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 CEACAM3P40198 252 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 RPL30P62888 115 aaKnown RBP16.72■□□□□ 0.27
SHISA4-201ENST00000362011 MINOS1Q5TGZ0 78 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 TP53RKQ96S44 253 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 OR51J1Q9H342 316 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 DPM3Q9P2X0 92 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 TBL2Q9Y4P3 447 aaKnown RBP16.72■□□□□ 0.27
SHISA4-201ENST00000362011 MINOS1-NBL1R4GNA1 71 aa16.72■□□□□ 0.27
SHISA4-201ENST00000362011 LINC00473A8K010 186 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 LEUTXA8MZ59 168 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 DUS4LO95620 317 aaKnown RBP16.71■□□□□ 0.27
SHISA4-201ENST00000362011 GPR157Q5UAW9 335 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 TGIF2LXQ8IUE1 241 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 TCTEX1D1Q8N7M0 179 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 RPEQ96AT9 228 aa16.71■□□□□ 0.27
SHISA4-201ENST00000362011 IGHV1-69DA0A0B4J2H0 117 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 LY6LH3BQJ8 138 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 NPFFO15130 113 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 TXNL1O43396 289 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 IGHV1-69P01742 117 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 GAPDHP04406 335 aaKnown RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 REG1BP48304 166 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 ZNF816Q0VGE8 651 aaPredicted RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 DIAPH2-AS1Q14236 149 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM187Q14656 261 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 SP6Q3SY56 376 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 MIDNQ504T8 468 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 TPTE2P1Q5T6R2 138 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 C12orf45Q8N5I9 185 aaPredicted RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 DRAXINQ8NBI3 349 aaPredicted RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 COQ8AQ8NI60 647 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 MITD1Q8WV92 249 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 PHB2Q99623 299 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 MRPL20Q9BYC9 149 aaKnown RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 PRELID3BQ9Y3B1 194 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 EPHA1P21709 976 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 UCP1P25874 307 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 KIR2DS2P43631 304 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 LIAT1Q6ZQX7 453 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 LHFPL4Q7Z7J7 247 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 NABP2Q9BQ15 211 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 TMEM222Q9H0R3 208 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 FAM212BQ9NTI7 297 aaPredicted RBP16.7■□□□□ 0.26
SHISA4-201ENST00000362011 PRR13Q9NZ81 148 aa16.7■□□□□ 0.26
SHISA4-201ENST00000362011 A0A0B4J2A0 478 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 SSNA1O43805 119 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 AVPP01185 164 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 CT45A6P0DMU7 189 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 CT45A5P0DMU8 189 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 CT45A7P0DMV0 189 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 LINC00205P59089 165 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 SRPXP78539 464 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 ANKRD55Q3KP44 614 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 OR2B11Q5JQS5 317 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 LDLRAD2Q5SZI1 272 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 ZNF383Q8NA42 475 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 UXS1Q8NBZ7 420 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 GLYATL2Q8WU03 294 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 DDB2Q92466 427 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 MED28Q9H204 178 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 SHPKQ9UHJ6 478 aa16.69■□□□□ 0.26
SHISA4-201ENST00000362011 IGHV3OR16-10A0A075B7F0 116 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 OOSP1A8MZH6 123 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 FCGR3BO75015 233 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 APOA2P02652 100 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 SAA4P35542 130 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 TAGLNQ01995 201 aaKnown RBP16.68■□□□□ 0.26
SHISA4-201ENST00000362011 LIN54Q6MZP7 749 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 SPAG16Q8N0X2 631 aa16.68■□□□□ 0.26
SHISA4-201ENST00000362011 CADM3Q8N126 398 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms