RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CSN3P07498 182 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 FGFBP3Q8TAT2 258 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 OOEPA6NGQ2 149 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 DNPH1O43598 174 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 CBLN1P23435 193 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 TAS2R60P59551 318 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 TMEM54Q969K7 222 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 HELTA6NFD8 242 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 PDE6DO43924 150 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 OPRK1P41145 380 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 CD81P60033 236 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 OR8I2Q8N0Y5 310 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 ZNF441Q8N8Z8 693 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 OR2M7Q8NG81 312 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 FAM216AQ8WUB2 273 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 IMMP2LQ96T52 175 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 P2RX4Q99571 388 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 WDR54Q9H977 334 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 PRDM6Q9NQX0 595 aa11.86□□□□□ -0.51
COL6A1-201ENST00000361866 TRGV10A0A0A0MS01 117 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 APELAP0DMC3 54 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
COL6A1-201ENST00000361866 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
COL6A1-201ENST00000361866 SDF2L1Q9HCN8 221 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 DCAF16Q9NXF7 216 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 PXMP4Q9Y6I8 212 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 PLXNA4Q9HCM2 1894 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 PGPEP1LA6NFU8 196 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 DIRC3C9JPN6 131 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 MT-CO3P00414 261 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 GCGP01275 180 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CT45A6P0DMU7 189 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CT45A5P0DMU8 189 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CT45A7P0DMV0 189 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 FXYD3Q14802 87 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CT45A1Q5HYN5 189 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 ABHD12Q8N2K0 398 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CPEB3Q8NE35 698 aaKnown RBP11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CT45A3Q8NHU0 189 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 SLC45A2Q9UMX9 530 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CELA3AP09093 270 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 ORM2P19652 201 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 ZNF766Q5HY98 468 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 DNM1P46Q6ZS02 220 aa11.85□□□□□ -0.51
COL6A1-201ENST00000361866 CNIH1O95406 144 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 COX6A1P12074 109 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 FOLR2P14207 255 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 CCL1P22362 96 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 HGFACQ04756 655 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 ATOH7Q8N100 152 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 FAM131CQ96AQ9 280 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 PROCRQ9UNN8 238 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 RNF24Q9Y225 148 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 SERTM2A0A1B0GWG4 89 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 P2RY6Q15077 328 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 KCNMB1Q16558 191 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 Q56UQ5 140 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 RIPPLY2Q5TAB7 128 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 WDFY1Q8IWB7 410 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 LEAP2Q969E1 77 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 PLXNB3Q9ULL4 1909 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 SIAH2O43255 324 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 NPY1RP25929 384 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 LTBRP36941 435 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 MRPS11P82912 194 aaKnown RBP11.84□□□□□ -0.51
COL6A1-201ENST00000361866 SPEM2Q0P670 501 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 RND1Q92730 232 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 HIST1H2BLQ99880 126 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 DECR2Q9NUI1 292 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL6A1-201ENST00000361866 TFF3Q07654 80 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
COL6A1-201ENST00000361866 TCTEX1D1Q8N7M0 179 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 GATAD1Q8WUU5 269 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
COL6A1-201ENST00000361866 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
COL6A1-201ENST00000361866 C1QTNF9BB2RNN3 333 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 WNT9BO14905 357 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 SSTR5P35346 364 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 ID3Q02535 119 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 FBXW9Q5XUX1 488 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 TMEM251Q8N6I4 163 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 NHLRC2Q8NBF2 726 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 OR4D5Q8NGN0 318 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 IL36GQ9NZH8 169 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 SLC17A3O00476 420 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 ARL14EPLP0DKL9 152 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 USF1P22415 310 aaPredicted RBP11.83□□□□□ -0.52
COL6A1-201ENST00000361866 WNT5AP41221 380 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 SARAFQ96BY9 339 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 THSD7BQ9C0I4 1608 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 SLC25A5P05141 298 aaKnown RBP11.83□□□□□ -0.52
COL6A1-201ENST00000361866 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 CYP2G1PQ6ZSU1 146 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 ZNF525Q8N782 197 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 OR2D3Q8NGH3 330 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 SGK494Q96LW2 274 aa11.83□□□□□ -0.52
COL6A1-201ENST00000361866 TTTY12Q9BZ98 90 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms