RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 STPG1Q5TH74 334 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 SNX22Q96L94 193 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 DSPPQ9NZW4 1301 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 IGHV3OR15-7A0A075B7D8 119 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 HSPB1P04792 205 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 RPL29P47914 159 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 SUCLG1P53597 346 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 UCP2P55851 309 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 PSG6Q00889 435 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 C11orf91Q3C1V1 193 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 ZNF383Q8NA42 475 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 NPIPB11E5RHQ5 1161 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 KCNAB3O43448 404 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 SYNGR3O43761 229 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
CUX1-203ENST00000360264 MFAP2P55001 183 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 UNQ5815/PRO19632Q6UWF5 114 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 HSPB7Q9UBY9 170 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 HILPDAQ9Y5L2 63 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 ARID2Q68CP9 1835 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 NKX2-6A6NCS4 301 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 FFAR1O14842 300 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 GDF9O60383 454 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 HOGA1Q86XE5 327 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 NUBP1P53384 320 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 NEURL2Q9BR09 285 aa8.41□□□□□ -1.06
CUX1-203ENST00000360264 CDC42EP2O14613 210 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.066e-7■■■□□ 18.3
CUX1-203ENST00000360264 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 C1QL3Q5VWW1 255 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 C9orf40Q8IXQ3 194 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 ZP4Q12836 540 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 INSL4Q14641 139 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 HIKESHIQ53FT3 197 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
CUX1-203ENST00000360264 TBX15Q96SF7 602 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 NPVFQ9HCQ7 196 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 DSCAMO60469 2012 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 A0A087X0M5 115 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 A0A1B0GX30 115 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 TMEM183AQ8IXX5 376 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 ACANP16112 2415 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 DNM1P46Q6ZS02 220 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 SPNS2Q8IVW8 549 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 TUBA4BQ9H853 241 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 ELOVL5Q9NYP7 299 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 BGLAPP02818 100 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 STARD6P59095 220 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 LRRC75AQ8NAA5 344 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 DYRK2Q92630 601 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 PKIBQ9C010 78 aa8.4□□□□□ -1.06
CUX1-203ENST00000360264 CD1AP06126 327 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 WNT5AP41221 380 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 ZNF137PP52743 207 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 STRCP1A6NGW2 1772 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 ADRA2AP08913 450 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 OR4B1Q8NGF8 309 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 RHOVQ96L33 236 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 GPR61Q9BZJ8 451 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 ZNF729A6NN14 1252 aaPredicted RBP8.4□□□□□ -1.07
CUX1-203ENST00000360264 SOCS1O15524 211 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 ASAH2BP0C7U1 165 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 LIMS2Q7Z4I7 341 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 OR9G1Q8NH87 305 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 KCNE5Q9UJ90 142 aa8.4□□□□□ -1.07
CUX1-203ENST00000360264 LOC105371242A0A075B767 164 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 GFRA1P56159 465 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 A0A1B0GTH9 108 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 BVESQ8NE79 360 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 FABP2P12104 132 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 TRAV20A0A0B4J274 112 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 hCG_38984A0A1B0GV85 526 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 HOXB3P14651 431 aaPredicted RBP8.39□□□□□ -1.07
CUX1-203ENST00000360264 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
CUX1-203ENST00000360264 HSF4Q9ULV5 492 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 EEF1AKMT3Q96AZ1 226 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 JMJD8Q96S16 334 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 PAGE4O60829 102 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 CT62P0C5K7 136 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 NMUP48645 174 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 PCSK4Q6UW60 755 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 TNFSF18Q9UNG2 199 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 FUT9Q9Y231 359 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 WNK3Q9BYP7 1800 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 ASPDHA6ND91 283 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 FAM60AQ9NP50 221 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 OR4C45A6NMZ5 311 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 CELA2BP08218 269 aaPredicted RBP8.39□□□□□ -1.07
CUX1-203ENST00000360264 ADAMTS17Q8TE56 1095 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 PRO1933Q9H354 126 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 TUBD1Q9UJT1 453 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 TAF1LQ8IZX4 1826 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 PIEZO2Q9H5I5 2752 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 IGF2P01344 180 aa8.39□□□□□ -1.07
CUX1-203ENST00000360264 EWSR1Q01844 656 aaKnown RBP eCLIP8.39□□□□□ -1.072e-6■■■□□ 16.3
CUX1-203ENST00000360264 CCL28Q9NRJ3 127 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms