RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ATRQ13535 2644 aa11.34□□□□□ -0.59
PDLIM5-203ENST00000359265 LOC105371242A0A075B767 164 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 SAA2-SAA4A0A096LPE2 208 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 A0A1W2PPE3 182 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 G3V3Q6 166 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 SAA2P0DJI9 122 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 RPA2P15927 270 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF134P52741 427 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 IAH1Q2TAA2 248 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 UTF1Q5T230 341 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 LYZL2Q7Z4W2 148 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 LINC00311Q8N616 119 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 OR9G1Q8NH87 305 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 CLDND2Q8NHS1 167 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 WDR89Q96FK6 387 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
PDLIM5-203ENST00000359265 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 A8MXK9 166 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 M0R1W7 72 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 SLC25A16P16260 332 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 VDAC1P21796 283 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 KIR2DS2P43631 304 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 THBS3P49746 956 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 ERVFRD-1P60508 538 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 RPL30P62888 115 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 RPL39P5Q59GN2 51 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF596Q8TC21 504 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 PPP1R1CQ8WVI7 109 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 TNFRSF14Q92956 283 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 OR10C1Q96KK4 312 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 S1PR3Q99500 378 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 ONECUT1Q9UBC0 465 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 PRELID3BQ9Y3B1 194 aa11.32□□□□□ -0.6
PDLIM5-203ENST00000359265 J3QR06 171 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 TOR1AO14656 332 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 FOXH1O75593 365 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 ATG12O94817 140 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 PET100P0DJ07 73 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 IL3RAP26951 378 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 LPAR6P43657 344 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 AKR1C2P52895 323 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 CLEC12BQ2HXU8 276 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 LRRC37A5PQ49AS3 106 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 Q5BKY6 102 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 THOC7Q6I9Y2 204 aaKnown RBP11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 FAM71F2Q6NXP2 309 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 ODF3L1Q8IXM7 274 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 SPAG16Q8N0X2 631 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 KIR3DL3Q8N743 410 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 ZBTB8BQ8NAP8 495 aaPredicted RBP11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 THAP6Q8TBB0 222 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 CD300LFQ8TDQ1 290 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 GSKIPQ9P0R6 139 aa11.31□□□□□ -0.6
PDLIM5-203ENST00000359265 FXYD6-FXYD2A0A087WZ82 144 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 TRAV14DV4A0A0A6YYC5 116 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 LINC00473A8K010 186 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 SNAPC5O75971 98 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 LMO4P61968 165 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF585BQ52M93 769 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 PRSS57Q6UWY2 283 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 CLEC9AQ6UXN8 241 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF833PQ6ZTB9 187 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 OR11H4Q8NGC9 324 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 GRPEL2Q8TAA5 225 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 LSM10Q969L4 123 aaKnown RBP11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 TMEM186Q96B77 213 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 ARHGAP32A7KAX9 2087 aa11.3□□□□□ -0.6
PDLIM5-203ENST00000359265 IGHV2-26A0A0B4J1V2 119 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 HMSDA8MTL9 139 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 PROP1O75360 226 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 MPC2O95563 127 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 SLC25A4P12235 298 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 SLC25A6P12236 298 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 PSMB6P28072 239 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 PRRX1P54821 245 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 ZNF816Q0VGE8 651 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 IL15RAQ13261 267 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 NCR3LG1Q68D85 454 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 C11orf87Q6NUJ2 197 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 C9orf62Q8N4C0 152 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 RRNAD1Q96FB5 475 aaKnown RBP11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 AMMECR1Q9Y4X0 333 aaPredicted RBP11.29□□□□□ -0.6
PDLIM5-203ENST00000359265 IGHV4-30-2A0A087WSY4 118 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms