RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 BSNQ9UPA5 3926 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 MBD3L4A6NDZ8 208 aaPredicted RBP13.44□□□□□ -0.26
PTPN5-201ENST00000358540 MBD3L3A6NE82 208 aaPredicted RBP13.44□□□□□ -0.26
PTPN5-201ENST00000358540 MBD3L5A6NJ08 208 aaPredicted RBP13.44□□□□□ -0.26
PTPN5-201ENST00000358540 DVL1O14640 695 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 ICAM4Q14773 271 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 ZNF718Q3SXZ3 478 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 WDR82Q6UXN9 313 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 BEND2Q8NDZ0 799 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 MBD3L2Q8NHZ7 208 aaPredicted RBP13.44□□□□□ -0.26
PTPN5-201ENST00000358540 SNHG12Q9BXW3 62 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 CXXC4Q9H2H0 198 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 SH3BGRL2Q9UJC5 107 aa13.44□□□□□ -0.26
PTPN5-201ENST00000358540 SMG1Q96Q15 3661 aaKnown RBP13.43□□□□□ -0.26
PTPN5-201ENST00000358540 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 H3BP45 60 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 IGLV2-14P01704 120 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 RPL23AP62750 156 aaKnown RBP13.43□□□□□ -0.26
PTPN5-201ENST00000358540 EWSR1Q01844 656 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN5-201ENST00000358540 SPRNQ5BIV9 151 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 TMEM217Q8N7C4 229 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 SLC25A15Q9Y619 301 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 CST7O76096 145 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 IGLV1-44P01699 117 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 SERPINE2P07093 398 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 GABRA2P47869 451 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 NMSQ5H8A3 153 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 MRGPRDQ8TDS7 321 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 CBY1Q9Y3M2 126 aa13.43□□□□□ -0.26
PTPN5-201ENST00000358540 TMEM210A6NLX4 147 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 H0Y980 276 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 TMEM50AO95807 157 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 MDH2P40926 338 aaKnown RBP13.42□□□□□ -0.26
PTPN5-201ENST00000358540 ASCL5Q7RTU5 278 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 OR2C3Q8N628 320 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 BOD1Q96IK1 185 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 DCTN5Q9BTE1 182 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 KIAA1456Q9P272 454 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 VDAC1P21796 283 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 NBL1P41271 181 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 P2RY6Q15077 328 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 LTC4SQ16873 150 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 IGFL3Q6UXB1 125 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 TMEM183AQ8IXX5 376 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 ZNF808Q8N4W9 903 aaPredicted RBP13.42□□□□□ -0.26
PTPN5-201ENST00000358540 OR52L2PQ8NGH6 319 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 RFESDQ8TAC1 157 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 PLPPR2Q96GM1 343 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 RAB11AP62491 216 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 ACP7Q6ZNF0 438 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 CBLN4Q9NTU7 201 aa13.42□□□□□ -0.26
PTPN5-201ENST00000358540 PLCE1Q9P212 2302 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 IGHV3-43A0A0B4J1X8 118 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 CLDN34H7C241 214 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 IGHV3-43DP0DP04 118 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 BMP5P22003 454 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 VAMP2P63027 116 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 EDDM3AQ14507 147 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 C22orf34Q6ZV56 151 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 SLC35E3Q7Z769 313 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 OR5D13Q8NGL4 314 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 GPR146Q96CH1 333 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 SPIN2AQ99865 258 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 SPIN2BQ9BPZ2 258 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 LRFN3Q9BTN0 628 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 C12orf77C9JDV5 145 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 COL10A1Q03692 680 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 Q6ZRM9 215 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 OR4X1Q8NH49 305 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 COQ2Q96H96 371 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 HES4Q9HCC6 221 aa13.41□□□□□ -0.26
PTPN5-201ENST00000358540 CHD3Q12873 2000 aaKnown RBP13.4□□□□□ -0.26
PTPN5-201ENST00000358540 IGHV3OR15-7A0A075B7D8 119 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 CHST1O43916 411 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 IGKV1-39P01597 117 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 IGKV1D-39P04432 117 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 EGR1P18146 543 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 KITLGP21583 273 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 S100GP29377 79 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 SSTR5P35346 364 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 FAM27E3Q08E93 113 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 C1orf185Q5T7R7 199 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 MOB1BQ7L9L4 216 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 ACTR3CQ9C0K3 210 aaPredicted RBP13.4□□□□□ -0.26
PTPN5-201ENST00000358540 TMEM30CPA0ZSE6 113 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 MARCH11A6NNE9 402 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 DFFBO76075 338 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 HSPB1P04792 205 aaKnown RBP13.4□□□□□ -0.26
PTPN5-201ENST00000358540 MMP9P14780 707 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 FOXC1Q12948 553 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 MBNL3Q9NUK0 354 aaKnown RBP13.4□□□□□ -0.26
PTPN5-201ENST00000358540 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
PTPN5-201ENST00000358540 DEFB108AA8MXU0 73 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 OR4A8P0C604 315 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 RUNX1Q01196 453 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 DRAM1Q8N682 238 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 TMEM171Q8WVE6 324 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
PTPN5-201ENST00000358540 TUBG1P23258 451 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms