RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 SMIM19Q96E16 107 aa11.85□□□□□ -0.51
IFT20-202ENST00000357896 GHRLQ9UBU3 117 aa11.85□□□□□ -0.51
IFT20-202ENST00000357896 ZNF230Q9UIE0 474 aaPredicted RBP11.85□□□□□ -0.51
IFT20-202ENST00000357896 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.84□□□□□ -0.51
IFT20-202ENST00000357896 TRBV5-5A0A0J9YX44 114 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 MSGN1A6NI15 193 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 LGALS9O00182 355 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 PROP1O75360 226 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 RBMXL2O75526 392 aaKnown RBP11.84□□□□□ -0.51
IFT20-202ENST00000357896 ALPLP05186 524 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 CRYGBP07316 175 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 LIMS3P0CW19 117 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 LIMS4P0CW20 117 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 GABRB1P18505 474 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 TMPRSS11AQ6ZMR5 421 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 MOB1BQ7L9L4 216 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 PTX4Q96A99 478 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 FAAP24Q9BTP7 215 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 CHMP1AQ9HD42 196 aaPredicted RBP11.84□□□□□ -0.51
IFT20-202ENST00000357896 AKIP1Q9NQ31 210 aa11.84□□□□□ -0.51
IFT20-202ENST00000357896 MRPS18AQ9NVS2 196 aaKnown RBP11.84□□□□□ -0.51
IFT20-202ENST00000357896 RPL36Q9Y3U8 105 aaKnown RBP11.84□□□□□ -0.51
IFT20-202ENST00000357896 SAC3D1A6NKF1 404 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 UBE2CO00762 179 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 MPPED1O15442 326 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 OGG1O15527 345 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 ATP8B1O43520 1251 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 NAPSAO96009 420 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 IGLV2-23P01705 113 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 APELAP0DMC3 54 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 CBLN1P23435 193 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 LINC00205P59089 165 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 YIF1BQ5BJH7 314 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
IFT20-202ENST00000357896 ZNF880Q6PDB4 577 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 OR13C5Q8NGS8 318 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 SETD6Q8TBK2 473 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 RIMS4Q9H426 269 aaPredicted RBP11.83□□□□□ -0.52
IFT20-202ENST00000357896 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 BABAM2Q9NXR7 383 aa11.83□□□□□ -0.52
IFT20-202ENST00000357896 EXOSC1Q9Y3B2 195 aaKnown RBP11.83□□□□□ -0.52
IFT20-202ENST00000357896 TRBV9A0A0B4J1U6 114 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 GGCTO75223 188 aaKnown RBP11.82□□□□□ -0.52
IFT20-202ENST00000357896 MED14OSP0DP75 135 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 CBX3Q13185 183 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
IFT20-202ENST00000357896 GLT8D1Q68CQ7 371 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 TMEM61Q8N0U2 210 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 NECAP1Q8NC96 275 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 RHOXF1Q8NHV9 184 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 KCNG3Q8TAE7 436 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 HARBI1Q96MB7 349 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 UQCC2Q9BRT2 126 aa11.82□□□□□ -0.52
IFT20-202ENST00000357896 TAGLNQ01995 201 aaKnown RBP11.81□□□□□ -0.52
IFT20-202ENST00000357896 DEFB135Q30KP9 77 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 TM4SF20Q53R12 229 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 C6orf201Q7Z4U5 140 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 NKAIN3Q8N8D7 197 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.81□□□□□ -0.52
IFT20-202ENST00000357896 SLC7A6OSQ96CW6 309 aaPredicted RBP11.81□□□□□ -0.52
IFT20-202ENST00000357896 OR1A1Q9P1Q5 309 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 MGAT4AQ9UM21 535 aa11.81□□□□□ -0.52
IFT20-202ENST00000357896 TRBV5-7A0A0A0MS05 114 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 A0A1W2PPK0 400 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 PPP5D1E7EU14 171 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 M0R1X1 148 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 SHOXO15266 292 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 OR2C1O95371 312 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 EDN2P20800 178 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 RNF183Q96D59 192 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 SLC29A1Q99808 456 aa11.8□□□□□ -0.52
IFT20-202ENST00000357896 FGF20Q9NP95 211 aaPredicted RBP11.8□□□□□ -0.52
IFT20-202ENST00000357896 TRAV25A0A0B4J276 109 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 SCAF4O95104 1147 aaKnown RBP11.79□□□□□ -0.52
IFT20-202ENST00000357896 PRH1P02810 166 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 UBBP0CG47 229 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 DCKP27707 260 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 ETV1P50549 477 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 TCTAP57738 103 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
IFT20-202ENST00000357896 ZNF45Q02386 682 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 TNXAQ16473 311 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 C15orf32Q32M92 178 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 TMEM177Q53S58 311 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 OR2G6Q5TZ20 316 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 LINC00336Q6ZUF6 198 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 TEX45Q8NA69 505 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 SRSF12Q8WXF0 261 aaKnown RBP11.79□□□□□ -0.52
IFT20-202ENST00000357896 CACNG8Q8WXS5 425 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 SPIN2AQ99865 258 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 SPIN2BQ9BPZ2 258 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 MLXQ9UH92 298 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 VPS13DQ5THJ4 4388 aa11.79□□□□□ -0.52
IFT20-202ENST00000357896 TRBV6-6A0A0A6YYG2 114 aa11.78□□□□□ -0.52
IFT20-202ENST00000357896 KIR2DL5BA0A0G2JN68 375 aa11.78□□□□□ -0.52
IFT20-202ENST00000357896 KIR2DL5BA0A0G2JPC4 375 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms