RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 APOBEC3AP31941 199 aaPredicted RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 OTX2P32243 289 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 SUMO1P63165 101 aaKnown RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PMP22Q01453 160 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 ARL16Q0P5N6 197 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR8B8Q15620 311 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 TMEM42Q69YG0 159 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 TMEM108Q6UXF1 575 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PLPPR1Q8TBJ4 325 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR51I2Q9H344 312 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 C11orf1Q9H5F2 150 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 PROK2Q9HC23 129 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 CISD1Q9NZ45 108 aaKnown RBP7□□□□□ -1.29
CDC42SE1-201ENST00000357235 MTCH1Q9NZJ7 389 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR1A1Q9P1Q5 309 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 NAT8Q9UHE5 227 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 CACNA1EQ15878 2313 aa7□□□□□ -1.29
CDC42SE1-201ENST00000357235 GJE1A6NN92 205 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 SYNGR2O43760 224 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 NGFP01138 241 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 CTXN2P0C2S0 81 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 GDF1P27539 372 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 GCH1P30793 250 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 CDKN1AP38936 164 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 RIPPLY3P57055 190 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 PCBD1P61457 104 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 NHLH1Q02575 133 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF726P1Q15940 193 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 SPATA46Q5T0L3 261 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 CPT1CQ8TCG5 803 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLDN23Q96B33 292 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAPPC1Q9Y5R8 145 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 MRPL33O75394 65 aaKnown RBP6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 MDH2P40926 338 aaKnown RBP6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 DAZAP2Q15038 168 aaPredicted RBP6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 SP5Q6BEB4 398 aaPredicted RBP6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 ASCL4Q6XD76 172 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZDHHC23Q8IYP9 409 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR2V1Q8NHB1 315 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF596Q8TC21 504 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 MANBALQ9NQG1 85 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 PRDM6Q9NQX0 595 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 ATP23Q9Y6H3 246 aa6.99□□□□□ -1.29
CDC42SE1-201ENST00000357235 KNTC1P50748 2209 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 IGHV1-45A0A0A0MS14 117 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 A6NJY4 79 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 DKK1O94907 266 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 SERPINA7P05543 415 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 FOXG1P55316 489 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLDN15P56746 228 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 MLF1P58340 268 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 RPS20P60866 119 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZXDAP98168 799 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 SPINK9Q5DT21 86 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 VWA1Q6PCB0 445 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 FOXL2NBQ6ZUU3 175 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR5AU1Q8NGC0 362 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR5D13Q8NGL4 314 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR4F5Q8NH21 305 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR4C12Q96R67 309 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 OR4F4Q96R69 305 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 EXPH5Q8NEV8 1989 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 AHRRA9YTQ3 701 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 H0Y980 276 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 SIRPB1O00241 398 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 KRASP01116 189 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 IFNA1P01562 189 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 TYMSP04818 313 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 CFIP05156 583 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 FGF12P61328 243 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 ARF6P62330 175 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 HBG1P69891 147 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 HBG2P69892 147 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 ARF1P84077 181 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 KCNIP4Q6PIL6 250 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 GATAD1Q8WUU5 269 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 BTF3L4Q96K17 158 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 RAB40CQ96S21 281 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 P2RX4Q99571 388 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 MEGF9Q9H1U4 602 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 SLC35D1Q9NTN3 355 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 CLN8Q9UBY8 286 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 COL5A1P20908 1838 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 TRAV1-1A0A0B4J248 108 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 A0A0U1RQK1 487 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 LRRC3CA6NJW4 275 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 ZNF716A6NP11 495 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 HYPMO75409 117 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 NAPSAO96009 420 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 PDGFBP01127 241 aaPredicted RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 IGLC2P0DOY2 106 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 IGLC3P0DOY3 106 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 PSG1P11464 419 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 COX6A1P12074 109 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 EGR1P18146 543 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 SMIM21Q3B7S5 101 aa6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 MRPL14Q6P1L8 145 aaKnown RBP6.98□□□□□ -1.29
CDC42SE1-201ENST00000357235 CYP2G1PQ6ZSU1 146 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms