RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 NUDT3O95989 172 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 PPIAL4FP0DN26 164 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 AREGP15514 252 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 GUCA1AP43080 201 aaPredicted RBP6.5□□□□□ -1.37
CCR9-201ENST00000355983 RBM11P57052 281 aaKnown RBP6.5□□□□□ -1.37
CCR9-201ENST00000355983 CLRN1P58418 232 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 RPS21P63220 83 aaKnown RBP6.5□□□□□ -1.37
CCR9-201ENST00000355983 UBALD2Q8IYN6 164 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 NEUROG1Q92886 237 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 PIGTQ969N2 578 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 RCHY1Q96PM5 261 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 MED29Q9NX70 200 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 NAT8BQ9UHF3 227 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 WASHC3Q9Y3C0 194 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 TRAV8-6A0A0B4J262 113 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 E9PLN8 166 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 K7EP34 96 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 ZNF205O95201 554 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 CLDN17P56750 224 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 HLA-DQA1Q5Y7H0 255 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 ST6GALNAC3Q8NDV1 305 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 GJC3Q8NFK1 279 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 NPCDR1Q9BY65 106 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 CACNG5Q9UF02 275 aa6.5□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1D-13A0A0B4J2D9 117 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MUC21A0A0G2JKD1 596 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MUC21A0A140T8X8 626 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 PMS2P5A8MQ11 134 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 H3BRM9 83 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 RER1O15258 196 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MT-CO2P00403 227 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1-13P0DP09 117 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 SRFP11831 508 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 PTGDSP41222 190 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 PHYHD1Q5SRE7 291 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MUC21Q5SSG8 566 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MYO7BQ6PIF6 2116 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 Q6ZRM9 215 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 OR10W1Q8NGF6 305 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 FAM131CQ96AQ9 280 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 OR2V2Q96R30 315 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 SIGMAR1Q99720 223 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 CCL28Q9NRJ3 127 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 GPR27Q9NS67 375 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 ABI3Q9P2A4 366 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 COLQQ9Y215 455 aaPredicted RBP6.49□□□□□ -1.37
CCR9-201ENST00000355983 HS3ST3A1Q9Y663 406 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 C9orf118A6NHY6 69 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 MPDU1O75352 247 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 WISP2O76076 250 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 EML2O95834 649 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 IL11P20809 199 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 ATP5G3P48201 142 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 PSG7Q13046 419 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 SLC25A53Q5H9E4 307 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 C18orf32Q8TCD1 76 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 SCRT2Q9NQ03 307 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 PLEK2Q9NYT0 353 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 ATP23Q9Y6H3 246 aa6.49□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1-27A0A075B6S5 117 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 TNFSF11O14788 317 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 WISP1O95388 367 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 CXorf1O96002 111 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 IAPPP10997 89 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 SRIP30626 198 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 GPM6AP51674 278 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 FUT6P51993 359 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 ZNF718Q3SXZ3 478 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 DPF1Q92782 380 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 BORCS8Q96FH0 119 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 DERL1Q9BUN8 251 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 FGF22Q9HCT0 170 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 DOCK11Q5JSL3 2073 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 SMIM27A0A1W2PRY6 76 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 K7EN84 100 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 OR2J3O76001 311 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1-39P01597 117 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1D-39P04432 117 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 SP9P0CG40 484 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 MC5RP33032 325 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 C5orf64Q2M2E5 130 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 SPANXN5Q5MJ07 72 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 C10orf128Q5T292 105 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 OR1N2Q8NGR9 330 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 MBD6Q96DN6 1003 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 ZNF442Q9H7R0 627 aa6.48□□□□□ -1.37
CCR9-201ENST00000355983 PNO1Q9NRX1 252 aaKnown RBP6.48□□□□□ -1.37
CCR9-201ENST00000355983 LIN7CQ9NUP9 197 aaKnown RBP6.48□□□□□ -1.37
CCR9-201ENST00000355983 NOTCH4Q99466 2003 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 IGKV1-12A0A0C4DH73 117 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 C7orf71A4D174 169 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 G3V3Y1 287 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 H0YIG0 161 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 ISLRO14498 428 aa6.47□□□□□ -1.37
CCR9-201ENST00000355983 SPRY1O43609 319 aaPredicted RBP6.47□□□□□ -1.37
CCR9-201ENST00000355983 HAND1O96004 215 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms