RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TRIM61Q5EBN2 209 aa11.51□□□□□ -0.57
TRIM4-203ENST00000355947 TIPARPQ7Z3E1 657 aaKnown RBP11.51□□□□□ -0.57
TRIM4-203ENST00000355947 C17orf82Q86X59 251 aaPredicted RBP11.51□□□□□ -0.57
TRIM4-203ENST00000355947 PLSCR2Q9NRY7 297 aa11.51□□□□□ -0.57
TRIM4-203ENST00000355947 AESQ08117 197 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 ST6GALNAC3Q8NDV1 305 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 MBD3L1Q8WWY6 194 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 P2RX4Q99571 388 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 KCNIP1Q9NZI2 227 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 PCNX1Q96RV3 2341 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 ZNF503-AS2A6NEH8 195 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 SERF1AO75920 110 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 PLGLB1Q02325 96 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 FXYD3Q14802 87 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 DAZAP2Q15038 168 aaPredicted RBP11.5□□□□□ -0.57
TRIM4-203ENST00000355947 ZNF324BQ6AW86 544 aaPredicted RBP11.5□□□□□ -0.57
TRIM4-203ENST00000355947 GBGT1Q8N5D6 347 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 C11orf42Q8N5U0 333 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 OR5A2Q8NGI9 324 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 OR10J1P30954 320 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 TDGF1P3P51864 188 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 MSMO1Q15800 293 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 HES3Q5TGS1 186 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 WDR74Q6RFH5 385 aaPredicted RBP11.5□□□□□ -0.57
TRIM4-203ENST00000355947 WNT10AQ9GZT5 417 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
TRIM4-203ENST00000355947 LOC102724200A0A096LPH7 203 aaPredicted RBP11.49□□□□□ -0.57
TRIM4-203ENST00000355947 SCO2A0A1W2PP80 73 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 ODAMA1E959 279 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 SYNGR4O95473 234 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 MGST1P10620 155 aaKnown RBP11.49□□□□□ -0.57
TRIM4-203ENST00000355947 CEACAM21Q3KPI0 293 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 ZNF585BQ52M93 769 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 ACY3Q96HD9 319 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 OBP2BQ9NPH6 170 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 SNURFLB1AK76 121 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 WNT9BO14905 357 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 SIAH2O43255 324 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 NPPCP23582 126 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 FOLR3P41439 243 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 AMTP48728 403 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 TMEM42Q69YG0 159 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 MRPL54Q6P161 138 aaKnown RBP11.49□□□□□ -0.57
TRIM4-203ENST00000355947 DCTN5Q9BTE1 182 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 TMEM147Q9BVK8 224 aa11.49□□□□□ -0.57
TRIM4-203ENST00000355947 OR2H2O95918 312 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 CCKARP32238 428 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 GNB1P62873 340 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
TRIM4-203ENST00000355947 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 TMEM242Q9NWH2 141 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 TRAV1-1A0A0B4J248 108 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 LRP5LA4QPB2 252 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 ZNF716A6NP11 495 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 IGHEP01854 428 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
TRIM4-203ENST00000355947 KMT5CQ86Y97 462 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 SMRP1Q8NCR6 262 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 CADM4Q8NFZ8 388 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 NPCDR1Q9BY65 106 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 NAT8BQ9UHF3 227 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 RBFOX2O43251 390 aaKnown RBP eCLIP11.48□□□□□ -0.57
TRIM4-203ENST00000355947 ARL14EPLP0DKL9 152 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 GNG3P63215 75 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 MMDQ15546 238 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 ETFRF1Q6IPR1 90 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 APOBEC3DQ96AK3 386 aaPredicted RBP11.48□□□□□ -0.57
TRIM4-203ENST00000355947 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
TRIM4-203ENST00000355947 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 MED13Q9UHV7 2174 aa11.48□□□□□ -0.57
TRIM4-203ENST00000355947 IGLV3-12A0A075B6K2 115 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 PINLYPA6NC86 204 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 H0Y8G0 127 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 FCGR3BO75015 233 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 TPPP2P59282 170 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 TRA2AQ13595 282 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ALKBH6Q3KRA9 238 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ACTL10Q5JWF8 245 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 CISD2Q8N5K1 135 aaKnown RBP11.47□□□□□ -0.57
TRIM4-203ENST00000355947 OR1L6Q8NGR2 347 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ANAPC16Q96DE5 110 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ATG2AQ2TAZ0 1938 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 IGHV1-45A0A0A0MS14 117 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 UMODP07911 640 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 PRAMEF5Q5TYX0 476 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 PRAMEF6Q5VXH4 476 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 LINC01551Q86U37 167 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 OR8I2Q8N0Y5 310 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 OR10G8Q8NGN5 311 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 CHRNA10Q9GZZ6 450 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 ASPMQ8IZT6 3477 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 IGLV3-32A0A0A0MS00 114 aa11.47□□□□□ -0.57
TRIM4-203ENST00000355947 PATE3B3GLJ2 98 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms