RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 EIF5AL1Q6IS14 154 aaKnown RBP14.12□□□□□ -0.15
VPS13B-201ENST00000355155 FOXRED2Q8IWF2 684 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 TNFRSF14Q92956 283 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 SAA2-SAA4A0A096LPE2 208 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 A0A1W2PPR1 153 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 MED6O75586 246 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 SAA2P0DJI9 122 aaPredicted RBP14.12□□□□□ -0.15
VPS13B-201ENST00000355155 UTF1Q5T230 341 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 PARD6GQ9BYG4 376 aaPredicted RBP14.12□□□□□ -0.15
VPS13B-201ENST00000355155 WFDC1Q9HC57 220 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 PRELID3BQ9Y3B1 194 aa14.12□□□□□ -0.15
VPS13B-201ENST00000355155 SYNGR2O43760 224 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 CHST1O43916 411 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 AKR1C2P52895 323 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 PRAMEF5Q5TYX0 476 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 RPL7L1Q6DKI1 246 aaKnown RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 DHRS7BQ6IAN0 325 aaPredicted RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 BTNL3Q6UXE8 466 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 SAT2Q96F10 170 aaPredicted RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 RALYQ9UKM9 306 aaKnown RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 ANKRD34BA5PLL1 514 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 MFSD2BA6NFX1 497 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 SEC11BP0C7V7 166 aa14.11□□□□□ -0.15
VPS13B-201ENST00000355155 HSD17B13Q7Z5P4 300 aaPredicted RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 PUSL1Q8N0Z8 303 aaKnown RBP14.11□□□□□ -0.15
VPS13B-201ENST00000355155 C19orf84I3L1E1 186 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 M0R1X1 148 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 SSSCA1O60232 199 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 SCAF4O95104 1147 aaKnown RBP14.1□□□□□ -0.15
VPS13B-201ENST00000355155 ZNF16P17020 682 aaPredicted RBP14.1□□□□□ -0.15
VPS13B-201ENST00000355155 OMGP23515 440 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
VPS13B-201ENST00000355155 OR4S2Q8NH73 311 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 BSCL2Q96G97 398 aaPredicted RBP14.1□□□□□ -0.15
VPS13B-201ENST00000355155 CHODLQ9H9P2 273 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 KLF2Q9Y5W3 355 aaPredicted RBP14.1□□□□□ -0.15
VPS13B-201ENST00000355155 NUDT19A8MXV4 375 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 SULT1A2P50226 295 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 VAMP2P63027 116 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 TNFRSF9Q07011 255 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 RPL39P5Q59GN2 51 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 BORCS7-ASMTA0A0B4J1R7 106 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 RNF141Q8WVD5 230 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 ST6GALNAC6Q969X2 333 aa14.1□□□□□ -0.15
VPS13B-201ENST00000355155 ZZEF1O43149 2961 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 FAM24AA6NFZ4 105 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 OVOL3O00110 214 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 FGF2P09038 288 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 SPP1P10451 314 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 LTC4SQ16873 150 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 COMMD7Q86VX2 200 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 R3HDM4Q96D70 268 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 NEIL1Q96FI4 390 aaPredicted RBP14.09□□□□□ -0.15
VPS13B-201ENST00000355155 S1PR3Q99500 378 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 SESN1Q9Y6P5 492 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 NCOR2Q9Y618 2525 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 MARCH11A6NNE9 402 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 G6PCP35575 357 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 SULT1A1P50225 295 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 ZNF816Q0VGE8 651 aaPredicted RBP14.09□□□□□ -0.15
VPS13B-201ENST00000355155 TMEM14EPQ6UXP3 125 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 ZNF429Q86V71 674 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 ZNF383Q8NA42 475 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 RAB1CQ92928 201 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 TSNAXQ99598 290 aaKnown RBP14.09□□□□□ -0.15
VPS13B-201ENST00000355155 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
VPS13B-201ENST00000355155 B8ZZF3 427 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 NQO2P16083 231 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 LYPD6BQ8NI32 183 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 RNASE11Q8TAA1 199 aaKnown RBP14.08□□□□□ -0.16
VPS13B-201ENST00000355155 HIPK2Q9H2X6 1198 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 A0A1W2PPH5 198 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 WRBO00258 174 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 IGHV1-8P0DP01 117 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 UBE2KP61086 200 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 NHLH2Q02577 135 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 ZNF266Q14584 549 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 H2BFWTQ7Z2G1 175 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 TMEM186Q96B77 213 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 SPOCK3Q9BQ16 436 aa14.08□□□□□ -0.16
VPS13B-201ENST00000355155 F12P00748 615 aaPredicted RBP14.07□□□□□ -0.16
VPS13B-201ENST00000355155 OR8U8P0C7N1 319 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CT45A6P0DMU7 189 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CT45A5P0DMU8 189 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CT45A7P0DMV0 189 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CCL3L1P16619 93 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 EPHA1P21709 976 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CXorf58Q96LI9 332 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 PCNX1Q96RV3 2341 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 J3QR06 171 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 AANATQ16613 207 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 OR8B3Q8NGG8 313 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 OR5AN1Q8NGI8 311 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 TIMD4Q96H15 378 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 CIB3Q96Q77 187 aaPredicted RBP14.07□□□□□ -0.16
VPS13B-201ENST00000355155 OR8B2Q96RD0 313 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 MAGT1Q9H0U3 335 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 RBKSQ9H477 322 aa14.07□□□□□ -0.16
VPS13B-201ENST00000355155 ZC4H2Q9NQZ6 224 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms