RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 ERRFI1Q9UJM3 462 aaPredicted RBP7.01□□□□□ -1.29
HTT-201ENST00000355072 F5H697 171 aa7□□□□□ -1.29
HTT-201ENST00000355072 FAM166AQ6J272 317 aa7□□□□□ -1.29
HTT-201ENST00000355072 LDLRAD3Q86YD5 345 aa7□□□□□ -1.29
HTT-201ENST00000355072 DLX4Q92988 240 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 H1FXQ92522 213 aaKnown RBP7□□□□□ -1.29
HTT-201ENST00000355072 TNFRSF14Q92956 283 aa7□□□□□ -1.29
HTT-201ENST00000355072 A0A1W2PP11 408 aa7□□□□□ -1.29
HTT-201ENST00000355072 ASPDHA6ND91 283 aa7□□□□□ -1.29
HTT-201ENST00000355072 DNASE2O00115 360 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 ZNF735P0CB33 412 aa7□□□□□ -1.29
HTT-201ENST00000355072 GRPP07492 148 aa7□□□□□ -1.29
HTT-201ENST00000355072 C6orf15Q6UXA7 325 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 SFTPA2Q8IWL1 248 aa7□□□□□ -1.29
HTT-201ENST00000355072 SFTPA1Q8IWL2 248 aa7□□□□□ -1.29
HTT-201ENST00000355072 TMEM106BQ9NUM4 274 aa7□□□□□ -1.29
HTT-201ENST00000355072 ADAMTS9Q9P2N4 1935 aa7□□□□□ -1.29
HTT-201ENST00000355072 TCRBV16S1A1N1A0A5B0 115 aa7□□□□□ -1.29
HTT-201ENST00000355072 A6NL46 340 aa7□□□□□ -1.29
HTT-201ENST00000355072 EDIL3O43854 480 aa7□□□□□ -1.29
HTT-201ENST00000355072 ELNP15502 786 aa7□□□□□ -1.29
HTT-201ENST00000355072 WDR25Q64LD2 544 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 SPNS3Q6ZMD2 512 aa7□□□□□ -1.29
HTT-201ENST00000355072 VSTM2LQ96N03 204 aa7□□□□□ -1.29
HTT-201ENST00000355072 MRM2Q9UI43 246 aaKnown RBP7□□□□□ -1.29
HTT-201ENST00000355072 FAM208BQ5VWN6 2430 aa7□□□□□ -1.29
HTT-201ENST00000355072 ORMDL3Q8N138 153 aa7□□□□□ -1.29
HTT-201ENST00000355072 CADM4Q8NFZ8 388 aa7□□□□□ -1.29
HTT-201ENST00000355072 OR2Z1Q8NG97 314 aa7□□□□□ -1.29
HTT-201ENST00000355072 RAB1CQ92928 201 aa7□□□□□ -1.29
HTT-201ENST00000355072 OR4C46A6NHA9 309 aa7□□□□□ -1.29
HTT-201ENST00000355072 MKRN2OSH3BPM6 223 aa7□□□□□ -1.29
HTT-201ENST00000355072 LHFPL4Q7Z7J7 247 aa7□□□□□ -1.29
HTT-201ENST00000355072 OR8B12Q8NGG6 310 aa7□□□□□ -1.29
HTT-201ENST00000355072 SLC6A13Q9NSD5 602 aa7□□□□□ -1.29
HTT-201ENST00000355072 TMEM56-RWDD3S4R434 201 aa7□□□□□ -1.29
HTT-201ENST00000355072 NUTF2P61970 127 aaKnown RBP7□□□□□ -1.29
HTT-201ENST00000355072 PNPLA5Q7Z6Z6 429 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 TMEM170AQ8WVE7 144 aa7□□□□□ -1.29
HTT-201ENST00000355072 WDYHV1Q96HA8 205 aa7□□□□□ -1.29
HTT-201ENST00000355072 AGMATQ9BSE5 352 aa7□□□□□ -1.29
HTT-201ENST00000355072 HEXA-AS1Q9H8Q6 139 aa7□□□□□ -1.29
HTT-201ENST00000355072 NUP210Q8TEM1 1887 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 TMEM189A5PLL7 270 aa7□□□□□ -1.29
HTT-201ENST00000355072 TCTN1Q2MV58 587 aa7□□□□□ -1.29
HTT-201ENST00000355072 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
HTT-201ENST00000355072 ALG14Q96F25 216 aa7□□□□□ -1.29
HTT-201ENST00000355072 DNAJC30Q96LL9 226 aa7□□□□□ -1.29
HTT-201ENST00000355072 GFRA4Q9GZZ7 299 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BKO60814 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BJP06899 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 OR9G9P0C7N8 305 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BOP23527 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BBP33778 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BDP58876 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BCP62807 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 ERV3-1Q14264 604 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST2H2BEQ16778 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST2H2BFQ5QNW6 126 aaPredicted RBP7□□□□□ -1.29
HTT-201ENST00000355072 FAM27BQ5VT28 67 aa7□□□□□ -1.29
HTT-201ENST00000355072 C19orf48Q6RUI8 117 aa7□□□□□ -1.29
HTT-201ENST00000355072 OR10D3Q8NH80 312 aa7□□□□□ -1.29
HTT-201ENST00000355072 SLC37A2Q8TED4 501 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BHQ93079 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BNQ99877 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 HIST1H2BMQ99879 126 aa7□□□□□ -1.29
HTT-201ENST00000355072 H3BQ85 93 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 DLL1O00548 723 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 SLC26A1Q9H2B4 701 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 K7N7A8 449 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 FGF17O60258 216 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 HYPMO75409 117 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 MT-CO3P00414 261 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 GNRHR2Q96P88 292 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 HS3ST3B1Q9Y662 390 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 RBP4P02753 201 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 ZGLP1P0C6A0 271 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 PGLYRP3Q96LB9 341 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 GEMIN7Q9H840 131 aaKnown RBP6.99□□□□□ -1.29
HTT-201ENST00000355072 NCOA6Q14686 2063 aaPredicted RBP6.99□□□□□ -1.29
HTT-201ENST00000355072 PAX1P15863 534 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 RBM11P57052 281 aaKnown RBP6.99□□□□□ -1.29
HTT-201ENST00000355072 LINC01545Q5VT33 79 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 FAM234AQ9H0X4 552 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 GP6Q9HCN6 339 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 TNFRSF19Q9NS68 423 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 FAM27D1Q5T7N8 215 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 A8MWV9 139 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 J3QR06 171 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 CCL5P13501 91 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 ACSF3Q4G176 576 aaPredicted RBP6.99□□□□□ -1.29
HTT-201ENST00000355072 SHISA5Q8N114 240 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 MOSPD3O75425 235 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 H2BFSP57053 126 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 SHISA4Q96DD7 197 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 C21orf140B9A014 251 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 AGERQ15109 404 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 SPRED2Q7Z698 418 aa6.99□□□□□ -1.29
HTT-201ENST00000355072 WNT5BQ9H1J7 359 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms