RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 RAMP3O60896 148 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 COX7A1P24310 79 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 THBS3P49746 956 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.38
CTSA-202ENST00000354880 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.38
CTSA-202ENST00000354880 ZNF833PQ6ZTB9 187 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 BEND2Q8NDZ0 799 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 CD300LFQ8TDQ1 290 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 ADTRPQ96IZ2 230 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 C2orf50Q96LR7 162 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 NMES1Q9C002 83 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 RANBP3Q9H6Z4 567 aaPredicted RBP12.71□□□□□ -0.38
CTSA-202ENST00000354880 UNKLQ9H9P5 680 aaKnown RBP12.71□□□□□ -0.38
CTSA-202ENST00000354880 LPAR2Q9HBW0 351 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 PRELID3BQ9Y3B1 194 aa12.71□□□□□ -0.38
CTSA-202ENST00000354880 FCGR3BO75015 233 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 IGKV1-39P01597 117 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 IGKV1D-39P04432 117 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 VDAC1P21796 283 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 IL3RAP26951 378 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 LPAR6P43657 344 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 ZNF137PP52743 207 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 IAH1Q2TAA2 248 aaPredicted RBP12.7□□□□□ -0.38
CTSA-202ENST00000354880 HLA-DRB5Q30154 266 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 FAM71F2Q6NXP2 309 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 NOXA1Q86UR1 476 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 PNKDQ8N490 385 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 SIRPDQ9H106 197 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 HEXA-AS1Q9H8Q6 139 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 ITPR2Q14571 2701 aa12.7□□□□□ -0.38
CTSA-202ENST00000354880 G3V3Q6 166 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 GZMKP49863 264 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 ZNF816Q0VGE8 651 aaPredicted RBP12.69□□□□□ -0.38
CTSA-202ENST00000354880 Q5BKY6 102 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 Q5PR19 223 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 VMO1Q7Z5L0 202 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 DDB2Q92466 427 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 CT45A6P0DMU7 189 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 CT45A5P0DMU8 189 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 CT45A7P0DMV0 189 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 KIR2DS2P43631 304 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 DVL1P1P54792 670 aaPredicted RBP12.69□□□□□ -0.38
CTSA-202ENST00000354880 NMSQ5H8A3 153 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 ZNF383Q8NA42 475 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 OR11H6Q8NGC7 330 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 OR4P4Q8NGL7 312 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 COMMD9Q9P000 198 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 GSKIPQ9P0R6 139 aa12.69□□□□□ -0.38
CTSA-202ENST00000354880 HECTD1Q9ULT8 2610 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 BUB1B-PAK6H3BSN5 160 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTSA-202ENST00000354880 TOX4O94842 621 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 S1PR2O95136 353 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 MMP9P14780 707 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 AKR1C2P52895 323 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 NKX2-5P52952 324 aaPredicted RBP12.68□□□□□ -0.38
CTSA-202ENST00000354880 PRSS57Q6UWY2 283 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 RNASE11Q8TAA1 199 aaKnown RBP12.68□□□□□ -0.38
CTSA-202ENST00000354880 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 PCGF1Q9BSM1 259 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 AMMECR1Q9Y4X0 333 aaPredicted RBP12.68□□□□□ -0.38
CTSA-202ENST00000354880 INSIG2Q9Y5U4 225 aa12.68□□□□□ -0.38
CTSA-202ENST00000354880 A0A096LNT2 108 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 HPRT1P00492 218 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 REG1BP48304 166 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 FGL1Q08830 312 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 KLRD1Q13241 179 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 DIAPH2-AS1Q14236 149 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 LRRC37A5PQ49AS3 106 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 HCP5Q6MZN7 132 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 TGIF2LXQ8IUE1 241 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 ZBTB8BQ8NAP8 495 aaPredicted RBP12.67□□□□□ -0.38
CTSA-202ENST00000354880 OR11H4Q8NGC9 324 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 OR4S2Q8NH73 311 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 LSM10Q969L4 123 aaKnown RBP12.67□□□□□ -0.38
CTSA-202ENST00000354880 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
CTSA-202ENST00000354880 MRPL20Q9BYC9 149 aaKnown RBP12.67□□□□□ -0.38
CTSA-202ENST00000354880 PLEKHA2Q9HB19 425 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 A0A0G2JRQ6 117 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 ATG12O94817 140 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 ARG1P05089 322 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 MSMBP08118 114 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 IL15RAQ13261 267 aa12.67□□□□□ -0.38
CTSA-202ENST00000354880 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 B4DSR2 109 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 KRASP01116 189 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
CTSA-202ENST00000354880 PSMB6P28072 239 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 PAX8Q06710 450 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 THOC7Q6I9Y2 204 aaKnown RBP12.66□□□□□ -0.38
CTSA-202ENST00000354880 GPR146Q96CH1 333 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 TBX15Q96SF7 602 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 NABP2Q9BQ15 211 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 PDZD2O15018 2839 aa12.66□□□□□ -0.38
CTSA-202ENST00000354880 ODF3BA8MYP8 253 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms