RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 GDF1P27539 372 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 GABRA2P47869 451 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
SND1-201ENST00000354725 UBE2NP61088 152 aaKnown RBP9.24□□□□□ -0.93
SND1-201ENST00000354725 SRSF1Q07955 248 aaKnown RBP eCLIP9.24□□□□□ -0.931e-7■■□□□ 13.7
SND1-201ENST00000354725 RTP5Q14D33 572 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 SPATA45Q537H7 98 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 AMMECR1LQ6DCA0 310 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 FGGYQ96C11 551 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 ZNF703Q9H7S9 590 aaPredicted RBP9.24□□□□□ -0.93
SND1-201ENST00000354725 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.24□□□□□ -0.93
SND1-201ENST00000354725 LHFPL6Q9Y693 200 aa9.24□□□□□ -0.93
SND1-201ENST00000354725 CCL20P78556 96 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 PLCXD2Q0VAA5 305 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 SDK2Q58EX2 2172 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 TMEM41BQ5BJD5 291 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 QTRT1Q9BXR0 403 aaKnown RBP9.23□□□□□ -0.93
SND1-201ENST00000354725 MRPS28Q9Y2Q9 187 aaKnown RBP9.23□□□□□ -0.93
SND1-201ENST00000354725 WSB1Q9Y6I7 421 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 ATMQ13315 3056 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 CDC14CA4D256 554 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 LIPT2A6NK58 231 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 MSTNO14793 375 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 EFNA2O43921 213 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 HIST1H1DP16402 221 aaKnown RBP9.23□□□□□ -0.93
SND1-201ENST00000354725 TIRAPP58753 221 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 LTC4SQ16873 150 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 NFAM1Q8NET5 270 aaPredicted RBP9.23□□□□□ -0.93
SND1-201ENST00000354725 SLAMF6Q96DU3 332 aa9.23□□□□□ -0.93
SND1-201ENST00000354725 TSPAN13O95857 204 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 PFN1P07737 140 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 FCGR2CP31995 323 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 APOBEC1P41238 236 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 SRSF6Q13247 344 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 OR2AJ1Q8NGZ0 328 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 CYYR1Q96J86 154 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 RASL10BQ96S79 203 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 DKK4Q9UBT3 224 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 IGLV3-12A0A075B6K2 115 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 IGLC7A0M8Q6 106 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 H7BYZ3 331 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 TIAF1O95411 115 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 RPL12P30050 165 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 TSPOP30536 169 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 ZNF92Q03936 586 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 LRRC10Q5BKY1 277 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 C9orf135Q5VTT2 229 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 TMEM211Q6ICI0 200 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 C5orf17Q8NAS9 161 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 MARCH1Q8TCQ1 289 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 CTDSP1Q9GZU7 261 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 THYN1Q9P016 225 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 CACNA1CQ13936 2221 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 A0A0U1RRA0 63 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 HSPB1P04792 205 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 TYMSP04818 313 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 TCN2P20062 427 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 PTGDSP41222 190 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 ZNF121P58317 390 aaPredicted RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 PNRC1Q12796 327 aaPredicted RBP9.22□□□□□ -0.93
SND1-201ENST00000354725 C20orf196Q8IYI0 205 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 OR2Y1Q8NGV0 311 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 FAM213BQ8TBF2 198 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 VN1R1Q9GZP7 353 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 COPS7AQ9UBW8 275 aa9.22□□□□□ -0.93
SND1-201ENST00000354725 S1PR2O95136 353 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 DBHP09172 617 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 MMP9P14780 707 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 OR1D4P47884 311 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 ZNF133P52736 654 aaPredicted RBP9.21□□□□□ -0.93
SND1-201ENST00000354725 PAFAH1B2P68402 229 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 ICAM4Q14773 271 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 PLXDC1Q8IUK5 500 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 OR5D14Q8NGL3 314 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 OR13G1Q8NGZ3 307 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 OR1L3Q8NH93 324 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 ZNF501Q96CX3 271 aaPredicted RBP9.21□□□□□ -0.93
SND1-201ENST00000354725 ALKBH4Q9NXW9 302 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 NAT8Q9UHE5 227 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 B3GALT5Q9Y2C3 310 aa9.21□□□□□ -0.93
SND1-201ENST00000354725 IGKV1-9A0A0C4DH69 117 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 FAM230AA0A1W2PPH8 454 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 MAP1LC3B2A6NCE7 125 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 CSN2P05814 226 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 CD55P08174 381 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 GPR6P46095 362 aaPredicted RBP9.21□□□□□ -0.94
SND1-201ENST00000354725 SLC25A47Q6Q0C1 308 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 CHST4Q8NCG5 386 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 OR1B1Q8NGR6 318 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.94
SND1-201ENST00000354725 DNAJA3Q96EY1 480 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms