RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 KRASP01116 189 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 G6PCP35575 357 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 CHRNA7P36544 502 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TDGF1P3P51864 188 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 C9orf135Q5VTT2 229 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 Q8N7P7 452 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 OR1L1Q8NH94 360 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 MS4A10Q96PG2 267 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 C20orf144Q9BQM9 153 aa9.58□□□□□ -0.88
CAPN9-202ENST00000354537 ZNF703Q9H7S9 590 aaPredicted RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 POLR3KQ9Y2Y1 108 aaPredicted RBP9.58□□□□□ -0.88
CAPN9-202ENST00000354537 ZG16O60844 167 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 RAMP3O60896 148 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 BTF3P20290 206 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 MPLP40238 635 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 FOXG1P55316 489 aaPredicted RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 RANP62826 216 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 TRIP6Q15654 476 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 H2BFWTQ7Z2G1 175 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 PRR18Q8N4B5 295 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 OR2M7Q8NG81 312 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 ZCCHC14Q8WYQ9 949 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 SFRP2Q96HF1 295 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 LY96Q9Y6Y9 160 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 NCKAP5O14513 1909 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 TRAV39A0A0B4J263 110 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 C1QTNF9BB2RNN3 333 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 OTX2P32243 289 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 OPRK1P41145 380 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 RPL30P62888 115 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 PMP22Q01453 160 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 DCAF10Q5QP82 559 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 HSD17B10Q99714 261 aaKnown RBP9.57□□□□□ -0.88
CAPN9-202ENST00000354537 OR2D2Q9H210 308 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 HES4Q9HCC6 221 aa9.57□□□□□ -0.88
CAPN9-202ENST00000354537 MDFIC2A0A1B0GVS7 189 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 S1PR2O95136 353 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 CD1BP29016 333 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 TMPRSS3P57727 454 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 CLEC12BQ2HXU8 276 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 ZNF766Q5HY98 468 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 WDR86Q86TI4 376 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 BCL2L2Q92843 193 aaPredicted RBP9.56□□□□□ -0.88
CAPN9-202ENST00000354537 A0A1W2PPV4 95 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 NXPH2O95156 264 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 HAND1O96004 215 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 SELEP16581 610 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 BRWD1-AS2P59051 145 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 TPPP2P59282 170 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 GAGE1Q13065 139 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 PDLIM3Q53GG5 364 aaPredicted RBP9.56□□□□□ -0.88
CAPN9-202ENST00000354537 PMS2CLQ68D20 193 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 OR52E5Q8NH55 327 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 SGMS2Q8NHU3 365 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 PRR7Q8TB68 274 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 IER2Q9BTL4 223 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 TMEM106BQ9NUM4 274 aa9.56□□□□□ -0.88
CAPN9-202ENST00000354537 C15orf62A8K5M9 175 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 C17orf98A8MV24 154 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 YPEL1O60688 119 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 TNFSF13O75888 250 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 NEURL1O76050 574 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 NDUFB4O95168 129 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 MT-CO3P00414 261 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 STAG3L2P0CL84 134 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 STAG3L3P0CL85 134 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 KITLGP21583 273 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 CD82P27701 267 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 TNFSF10P50591 281 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 PLGLB1Q02325 96 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 SRYQ05066 204 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
CAPN9-202ENST00000354537 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
CAPN9-202ENST00000354537 OR1C1Q15619 314 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 TBC1D28Q2M2D7 210 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 TEX43Q6ZNM6 134 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 NINJ1Q92982 152 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 C5orf30Q96GV9 206 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 YPEL2Q96QA6 119 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 CABIN1Q9Y6J0 2220 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 CXorf1O96002 111 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 OR3A1P47881 315 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 MCEMP1Q8IX19 187 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 OR10G8Q8NGN5 311 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 PRUNE2Q8WUY3 3088 aa9.55□□□□□ -0.88
CAPN9-202ENST00000354537 CHD3Q12873 2000 aaKnown RBP9.55□□□□□ -0.88
CAPN9-202ENST00000354537 TRBV9A0A0B4J1U6 114 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 GCH1P30793 250 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 TIMP3P35625 211 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 ATP5G3P48201 142 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 PRSS8Q16651 343 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 DCAF12Q5T6F0 453 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 CST9LP1Q5W188 147 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 TRAT1Q6PIZ9 186 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 C6orf15Q6UXA7 325 aaPredicted RBP9.54□□□□□ -0.88
CAPN9-202ENST00000354537 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
CAPN9-202ENST00000354537 MIEN1Q9BRT3 115 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms