RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 LCE6AA0A183 80 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 hCG_1809904A0A1W2PP81 198 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 A0A1W2PPE2 198 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 A0A1W2PR64 198 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 A0A1W2PRV1 198 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 MAGEB4O15481 346 aaPredicted RBP8.96□□□□□ -0.98
RTN3-204ENST00000354497 PRODHO43272 600 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 CCL3L1P16619 93 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 TBPP20226 339 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 NFYBP25208 207 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 PYCR1P32322 319 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 F2RL1P55085 397 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 FXYD6P3P58550 94 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 RPS25P62851 125 aaKnown RBP8.96□□□□□ -0.98
RTN3-204ENST00000354497 FAM3AP98173 230 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 MOGAT2Q3SYC2 334 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 IFI44LQ53G44 452 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 AKR1C8PQ5T2L2 129 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 GLT8D1Q68CQ7 371 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 ZNF529Q6P280 563 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 CD300LDQ6UXZ3 194 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 MEPCEQ7L2J0 689 aaKnown RBP8.96□□□□□ -0.98
RTN3-204ENST00000354497 C5orf24Q7Z6I8 188 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 Q8NFD4 153 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 OR51D1Q8NGF3 324 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 NUDCD2Q8WVJ2 157 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 CNN2Q99439 309 aaKnown RBP8.96□□□□□ -0.98
RTN3-204ENST00000354497 MCRIP2Q9BUT9 160 aaKnown RBP8.96□□□□□ -0.98
RTN3-204ENST00000354497 KRTAP17-1Q9BYP8 105 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 FXYD6Q9H0Q3 95 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 HRASLSQ9HDD0 168 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 GPR173Q9NS66 373 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 KCNG2Q9UJ96 466 aa8.96□□□□□ -0.98
RTN3-204ENST00000354497 DNAH1Q9P2D7 4330 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 IGKV1D-17A0A075B6S4 117 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 A0A087WWC5 75 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 SMCO3A2RU48 225 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 ZNF850A8MQ14 1090 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 GABARAPH6UMI1 98 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 GABRPO00591 440 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 RHBDL1O75783 438 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 LYL1P12980 280 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 TPT1P13693 172 aaKnown RBP8.95□□□□□ -0.98
RTN3-204ENST00000354497 OSMP13725 252 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 SLC6A6P31641 620 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 CX3CR1P49238 355 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 FHITP49789 147 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 SLC25A1P53007 311 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 OR12D2P58182 307 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 RPL31P62899 125 aaKnown RBP8.95□□□□□ -0.98
RTN3-204ENST00000354497 EFNB1P98172 346 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 SCGB2B2Q4G0G5 96 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
RTN3-204ENST00000354497 AWAT2Q6E213 333 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 OR8G2PQ6IF36 304 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 KCTD18Q6PI47 426 aaPredicted RBP8.95□□□□□ -0.98
RTN3-204ENST00000354497 C10orf99Q6UWK7 81 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 ZNF546Q86UE3 836 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 ZNF664Q8N3J9 261 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 CYB561A3Q8NBI2 242 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 OR52I1Q8NGK6 324 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 LYPD6BQ8NI32 183 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 SLAMF6Q96DU3 332 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 LYZL4Q96KX0 146 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 PRR25Q96S07 402 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 DNAJC27Q9NZQ0 273 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 TBL2Q9Y4P3 447 aaKnown RBP8.95□□□□□ -0.98
RTN3-204ENST00000354497 HILPDAQ9Y5L2 63 aa8.95□□□□□ -0.98
RTN3-204ENST00000354497 DNAH7Q8WXX0 4024 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 KIR2DL5BA0A0G2JN68 375 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 KIR2DL5BA0A0G2JPC4 375 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 C7orf77A4D0Y5 90 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 IFNA6P05013 189 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 EIF4EP06730 217 aaKnown RBP8.94□□□□□ -0.98
RTN3-204ENST00000354497 H1F0P07305 194 aaKnown RBP8.94□□□□□ -0.98
RTN3-204ENST00000354497 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 PSG2P11465 335 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 HSD11B1P28845 292 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 OTX1P32242 354 aaPredicted RBP8.94□□□□□ -0.98
RTN3-204ENST00000354497 OR3A1P47881 315 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 GSK3AP49840 483 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 PRDX4Q13162 271 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 TMEM200BQ69YZ2 307 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 FAM57BQ71RH2 274 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 KIR2DL5AQ8N109 375 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 LINC00471Q8N535 108 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 CSNK2A3Q8NEV1 391 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 OR2T27Q8NH04 317 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 ORAOV1Q8WV07 137 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 SPSB4Q96A44 273 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 PRRT1Q99946 306 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 TSSK6Q9BXA6 273 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 OR14J1Q9UGF5 321 aa8.94□□□□□ -0.98
RTN3-204ENST00000354497 A0A1B0GTI1 187 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 hCG_38984A0A1B0GV85 526 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 ANKRD20A5PA0PJZ0 165 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 FAM90A8PA6NJQ4 464 aa8.93□□□□□ -0.98
RTN3-204ENST00000354497 SH2D7A6NKC9 451 aaPredicted RBP8.93□□□□□ -0.98
RTN3-204ENST00000354497 ZNF878C9JN71 531 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms