RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 RDH8Q9NYR8 311 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 RYR2Q92736 4967 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 SACSQ9NZJ4 4579 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 M0R1X1 148 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 IGLV2-23P01705 113 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 PLAC9Q5JTB6 97 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 POC5Q8NA72 575 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 FAM3DQ96BQ1 224 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 ZMAT4Q9H898 229 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 SLC35D1Q9NTN3 355 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 STUB1Q9UNE7 303 aa11.09□□□□□ -0.63
PRPF40A-201ENST00000354363 H3BUA1 57 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 LDLRAD4O15165 306 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 IGLV1-51P01701 117 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 HSMCR30P0CW71 290 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 TRAM1Q15629 374 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 Q8N1Y9 231 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 OR5T1Q8NG75 326 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 OR56B1Q8NGI3 324 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 OR4A4PQ8NGN8 299 aa11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 RANGRFQ9HD47 186 aaPredicted RBP11.08□□□□□ -0.64
PRPF40A-201ENST00000354363 TENM2Q9NT68 2774 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 C13orf42A0A1B0GVH6 325 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 CNIH1O95406 144 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 CRYGBP07316 175 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 CD3GP09693 182 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 ZP3P21754 424 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 PJVKQ0ZLH3 352 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 PLA2G7Q13093 441 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 RSRP1Q9BUV0 290 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 DUSP21Q9H596 190 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 KCNK7Q9Y2U2 307 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 STARD9Q9P2P6 4700 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 LYSTQ99698 3801 aa11.07□□□□□ -0.64
PRPF40A-201ENST00000354363 TMEM272A0A1B0GTI8 110 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 FABP7O15540 132 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 DENRO43583 198 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 PSMA1P25786 263 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 CALRP27797 417 aaKnown RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 LGALS7P47929 136 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 SERPINB10P48595 397 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 FABP5Q01469 135 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 MLLT11Q13015 90 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 ANKRD13BQ86YJ7 626 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 C5orf30Q96GV9 206 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 TM2D3Q9BRN9 247 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 CABLES2Q9BTV7 478 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 OR2D2Q9H210 308 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 SDHAF2Q9NX18 166 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 V9GY05 133 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 A0A0G2JLM5 398 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 ANKRD34BA5PLL1 514 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 BET1O15155 118 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 RGS10O43665 173 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 LYL1P12980 280 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 AQP4P55087 323 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 KLF5Q13887 457 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 MOGAT2Q3SYC2 334 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 IGSF11Q5DX21 431 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 HES5Q5TA89 166 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 HARBI1Q96MB7 349 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 C19orf73Q9NVV2 129 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 NKX1-2Q9UD57 310 aaPredicted RBP11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 RAB22AQ9UL26 194 aa11.06□□□□□ -0.64
PRPF40A-201ENST00000354363 TRBV6-7A0A0A0MS04 114 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 A8MZ25 164 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 FCGR3AP08637 254 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 RANBP1P43487 201 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 MRPS15P82914 257 aaKnown RBP11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 DEFA5Q01523 94 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 TMEM177Q53S58 311 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 BVESQ8NE79 360 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 RAB3CQ96E17 227 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 TMEM68Q96MH6 324 aa11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 TINAGL1Q9GZM7 467 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-201ENST00000354363 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 BRI3O95415 125 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 MRGPRG-AS1Q2M3A8 158 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 IL34Q6ZMJ4 242 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 SGPP2Q8IWX5 399 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 OR10J5Q8NHC4 309 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 NRG4Q8WWG1 115 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 MAFIPQ8WZ33 124 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 MGLLQ99685 303 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 CCDC90BQ9GZT6 254 aa11.04□□□□□ -0.64
PRPF40A-201ENST00000354363 ANKRD65E5RJM6 399 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 SHOXO15266 292 aa11.03□□□□□ -0.64
PRPF40A-201ENST00000354363 DIRAS3O95661 229 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms