RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NDUFB4O95168 129 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 PTTG1IPP53801 180 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 GNB1P62873 340 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 AAED1Q7RTV5 226 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF709Q8N972 641 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 C22orf15Q8WYQ4 148 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 OR2W1Q9Y3N9 320 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 TIMM9Q9Y5J7 89 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF816-ZNF321PA0A0X1KG74 233 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 LHX2P50458 406 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 UBE2G2P60604 165 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 YPEL3P61236 119 aaPredicted RBP15.74■□□□□ 0.11
SCARF1-202ENST00000348987 DEFB123Q8N688 67 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 SAMD10Q9BYL1 202 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 DEPPQ9NTK1 212 aa15.74■□□□□ 0.11
SCARF1-202ENST00000348987 CLDN1O95832 211 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 CTXN2P0C2S0 81 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 CRISP2P16562 243 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 RPS16P62249 146 aaKnown RBP15.73■□□□□ 0.11
SCARF1-202ENST00000348987 ZNF324BQ6AW86 544 aaPredicted RBP15.73■□□□□ 0.11
SCARF1-202ENST00000348987 OR10D3Q8NH80 312 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 OR5P3Q8WZ94 311 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 LSM10Q969L4 123 aaKnown RBP15.73■□□□□ 0.11
SCARF1-202ENST00000348987 FOXB1Q99853 325 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 FAM103A1Q9BTL3 118 aaKnown RBP15.73■□□□□ 0.11
SCARF1-202ENST00000348987 PPP1R3CQ9UQK1 317 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 KIAA1549Q9HCM3 1950 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 DOCK7Q96N67 2140 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 LAMTOR5O43504 91 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 TDGF1P13385 188 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 CD99P14209 185 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 OTX2P32243 289 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 ATP5G3P48201 142 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 SRSF7Q16629 238 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCARF1-202ENST00000348987 IL1F10Q8WWZ1 152 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 SFRP2Q96HF1 295 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 BTF3L4Q96K17 158 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 WIPI2Q9Y4P8 454 aa15.73■□□□□ 0.11
SCARF1-202ENST00000348987 AQP7O14520 342 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 CYC1P08574 325 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 HNF1AP20823 631 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 SELENOTP62341 195 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 BAGE3Q86Y29 109 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 BAGE2Q86Y30 109 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 SF3B5Q9BWJ5 86 aaKnown RBP15.72■□□□□ 0.11
SCARF1-202ENST00000348987 OR2H1Q9GZK4 316 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 PINLYPA6NC86 204 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 NTN3O00634 580 aaPredicted RBP15.72■□□□□ 0.11
SCARF1-202ENST00000348987 OR5G3P0C626 314 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 SPINK2P20155 84 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 C9orf135Q5VTT2 229 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 LEMD1Q68G75 181 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 ALKBH2Q6NS38 261 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 Q6ZVH6 145 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 SGCZQ96LD1 299 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 FBXL7Q9UJT9 491 aa15.72■□□□□ 0.11
SCARF1-202ENST00000348987 FOLR3P41439 243 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 KRTDAPP60985 99 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 TFF3Q07654 80 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 CPEB3Q8NE35 698 aaKnown RBP15.71■□□□□ 0.11
SCARF1-202ENST00000348987 CRIM1Q9NZV1 1036 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 YLPM1P49750 1951 aaKnown RBP15.71■□□□□ 0.11
SCARF1-202ENST00000348987 P04436 131 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 CCL2P13500 99 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 COX5AP20674 150 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 SRD5A2P31213 254 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 TMEM14EPQ6UXP3 125 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 CPT1CQ8TCG5 803 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 TECTBQ96PL2 329 aa15.71■□□□□ 0.11
SCARF1-202ENST00000348987 TNRC6BQ9UPQ9 1833 aaKnown RBP15.71■□□□□ 0.11
SCARF1-202ENST00000348987 NBEAQ8NFP9 2946 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 TMPRSS2O15393 492 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 IGLV2-14P01704 120 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 ESDP10768 282 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 ZNF585BQ52M93 769 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 OR1L1Q8NH94 360 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 GAL3ST2Q9H3Q3 398 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 OR1A1Q9P1Q5 309 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 GJE1A6NN92 205 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 C3orf80F5H4A9 247 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 KITLGP21583 273 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 KRTAP27-1Q3LI81 207 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 SPATA45Q537H7 98 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 PPP1R32Q7Z5V6 425 aa15.7■□□□□ 0.1
SCARF1-202ENST00000348987 MRPL18Q9H0U6 180 aaKnown RBP15.7■□□□□ 0.1
SCARF1-202ENST00000348987 DIDO1Q9BTC0 2240 aaKnown RBP15.7■□□□□ 0.1
SCARF1-202ENST00000348987 MDFIC2A0A1B0GVS7 189 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 SH2D1BO14796 132 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 KRASP01116 189 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 THBS3P49746 956 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 TMEM105Q8N8V8 129 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 OR4B1Q8NGF8 309 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 OR1L6Q8NGR2 347 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 TUBG2Q9NRH3 451 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 TRBV20OR9-2A0A075B6H5 130 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 FAM90A10PA6NDY2 464 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 FAM90A18PA6NE21 464 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 FAM90A16PA6NEW6 464 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 FAM90A20PA6NIJ5 464 aa15.69■□□□□ 0.1
SCARF1-202ENST00000348987 NKX6-3A6NJ46 265 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms