RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 DEFA5Q01523 94 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RPL39P5Q59GN2 51 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 C1orf87Q8N0U7 546 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 GFOD1Q9NXC2 390 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LAMP3Q9UQV4 416 aa11.67□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NKX6-3A6NJ46 265 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 M0R1X1 148 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 C1QL1O75973 258 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ATP6V0CP27449 155 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 APOBEC3AP31941 199 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FHITP49789 147 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TNFRSF9Q07011 255 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MIDNQ504T8 468 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CD300LFQ8TDQ1 290 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ABHD14AQ9BUJ0 271 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MS4A5Q9H3V2 200 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RFNGQ9Y644 331 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TPRP12270 2363 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PPIAL4EA0A075B759 164 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 A0A1W2PPE3 182 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM218A2RU14 115 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 MARCH11A6NNE9 402 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PPIAL4DF5H284 164 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 FCGR3BO75015 233 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PLAUP00749 431 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PPIAL4FP0DN26 164 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NDUFB7P17568 137 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 NFYBP25208 207 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TAS2R30P59541 319 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ADORA2A-AS1P86434 159 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CDSNQ15517 529 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CT45A1Q5HYN5 189 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM182Q6ZP80 229 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 H2BFWTQ7Z2G1 175 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CT45A3Q8NHU0 189 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ATP5SQ99766 215 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 HSPB7Q9UBY9 170 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PPIAL4AQ9Y536 164 aa11.66□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ABCA4P78363 2273 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 DOCK11Q5JSL3 2073 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF729A6NN14 1252 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 AGPAT2O15120 278 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 PRH1P02810 166 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 METTL15P1P0C7V9 234 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CAMLGP49069 296 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RAB5CP51148 216 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RAB7AP51149 207 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF616Q08AN1 781 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 ZNF273Q14593 569 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 OR2G3Q8NGZ4 309 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 CORO2AQ92828 525 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RBKSQ9H477 322 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 LINC00574Q9H8X3 128 aa11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 SLC25A10Q9UBX3 287 aaPredicted RBP11.65□□□□□ -0.54
CDK5RAP1-202ENST00000346416 RAB29O14966 203 aa11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ARHGDIBP52566 201 aa11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 EFNB3Q15768 340 aa11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SPANXN5Q5MJ07 72 aa11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 C1orf229Q6ZS94 237 aaPredicted RBP11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 IDI2-AS1Q9NZ38 188 aa11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CISD1Q9NZ45 108 aaKnown RBP11.65□□□□□ -0.55
CDK5RAP1-202ENST00000346416 hADV38S2A0JD32 116 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 B9A039 149 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DLL1O00548 723 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 MMP23AO75900 390 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 DFFBO76075 338 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RUNX1Q01196 453 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 LY6DQ14210 128 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SVBPQ8N300 66 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ZCCHC14Q8WYQ9 949 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TSNAXQ99598 290 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 NKX6-2Q9C056 277 aaPredicted RBP11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TREM1Q9NP99 234 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 FAM96BQ9Y3D0 163 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HCFC1P51610 2035 aa11.64□□□□□ -0.55
CDK5RAP1-202ENST00000346416 MED19A0JLT2 244 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 SIAH2O43255 324 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 FCN3O75636 299 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 TSPAN15O95858 294 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 HPRT1P00492 218 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 RPL31P62899 125 aaKnown RBP11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ARL16Q0P5N6 197 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 ATRAIDQ6UW56 229 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 UNQ6494/PRO21346Q6UXR6 183 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 CA5BP1Q8WTZ4 195 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 GNPNAT1Q96EK6 184 aaPredicted RBP11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 C19orf12Q9NSK7 152 aa11.63□□□□□ -0.55
CDK5RAP1-202ENST00000346416 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms