RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 CHCHD2Q9Y6H1 151 aaPredicted RBP18.06■□□□□ 0.48
TRIM3-201ENST00000345851 RBFOX2O43251 390 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRIM3-201ENST00000345851 LSM10Q969L4 123 aaKnown RBP18.06■□□□□ 0.48
TRIM3-201ENST00000345851 TMEM204Q9BSN7 226 aa18.06■□□□□ 0.48
TRIM3-201ENST00000345851 FAM103A1Q9BTL3 118 aaKnown RBP18.06■□□□□ 0.48
TRIM3-201ENST00000345851 SAMD10Q9BYL1 202 aa18.06■□□□□ 0.48
TRIM3-201ENST00000345851 LOXL2Q9Y4K0 774 aa18.06■□□□□ 0.48
TRIM3-201ENST00000345851 ZNF585BQ52M93 769 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 TIPARPQ7Z3E1 657 aaKnown RBP18.05■□□□□ 0.48
TRIM3-201ENST00000345851 MRPL52Q86TS9 123 aaKnown RBP18.05■□□□□ 0.48
TRIM3-201ENST00000345851 OR2H1Q9GZK4 316 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 CLN8Q9UBY8 286 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 ZFP30Q9Y2G7 519 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 SYNGR1O43759 233 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 CCL2P13500 99 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 COX5AP20674 150 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 THBS3P49746 956 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 RNF114Q9Y508 228 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 TIMM9Q9Y5J7 89 aa18.05■□□□□ 0.48
TRIM3-201ENST00000345851 TRAPPC2LH3BP13 241 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 IGHV3-9P01782 118 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 CEACAM16Q2WEN9 425 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 ARL6IP6Q8N6S5 226 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 ZNF709Q8N972 641 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 OR5AU1Q8NGC0 362 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 PSMF1Q92530 271 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 CIB3Q96Q77 187 aaPredicted RBP18.04■□□□□ 0.48
TRIM3-201ENST00000345851 USF3Q68DE3 2245 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 IGLV2-14P01704 120 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 CCL3P10147 92 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 CRISP2P16562 243 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 MSMO1Q15800 293 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 BAGE3Q86Y29 109 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 BAGE2Q86Y30 109 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 OR1L1Q8NH94 360 aa18.04■□□□□ 0.48
TRIM3-201ENST00000345851 KRTDAPP60985 99 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 GCSAMLQ5JQS6 135 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 TMEM14EPQ6UXP3 125 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 OR2Y1Q8NGV0 311 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 SFRP2Q96HF1 295 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FOXB1Q99853 325 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 DOCK10Q96BY6 2186 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 MDFIC2A0A1B0GVS7 189 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A10PA6NDY2 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A18PA6NE21 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A16PA6NEW6 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A20PA6NIJ5 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A8PA6NJQ4 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A7PA6NKC0 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A22PA8MWA6 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A12PA8MX19 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A5PA8MXJ8 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A23PA8MXZ1 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A15PP0C7V4 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A13PP0C7W8 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A14PP0C7W9 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 FAM90A24PP0C7X0 464 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 ACP1P24666 158 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 RANP62826 216 aaKnown RBP18.03■□□□□ 0.48
TRIM3-201ENST00000345851 SRSF7Q16629 238 aaKnown RBP eCLIP18.03■□□□□ 0.48
TRIM3-201ENST00000345851 RNASE8Q8TDE3 154 aaKnown RBP18.03■□□□□ 0.48
TRIM3-201ENST00000345851 IMMP1LQ96LU5 166 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 PARD6GQ9BYG4 376 aaPredicted RBP18.03■□□□□ 0.48
TRIM3-201ENST00000345851 WDR54Q9H977 334 aa18.03■□□□□ 0.48
TRIM3-201ENST00000345851 PAFAH1B2P68402 229 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 FOXL1Q12952 345 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 SPINK9Q5DT21 86 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 FBXW9Q5XUX1 488 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 TRAV38-1A0A0B4J264 116 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 CDX4O14627 284 aaPredicted RBP18.02■□□□□ 0.48
TRIM3-201ENST00000345851 KITLGP21583 273 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 FKBP2P26885 142 aaKnown RBP18.02■□□□□ 0.48
TRIM3-201ENST00000345851 FOLR3P41439 243 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 DCAF12Q5T6F0 453 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 ZNF391Q9UJN7 358 aa18.02■□□□□ 0.48
TRIM3-201ENST00000345851 A0A1W2PNU3 283 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-201ENST00000345851 CDC34P49427 236 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-201ENST00000345851 LHX2P50458 406 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 MKXQ8IYA7 352 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 FGFRL1Q8N441 504 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 SLC35E1Q96K37 410 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 TMEM147Q9BVK8 224 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 NPCDR1Q9BY65 106 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 RIF1Q5UIP0 2472 aaKnown RBP18.01■□□□□ 0.47
TRIM3-201ENST00000345851 TRBV20OR9-2A0A075B6H5 130 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 STPG4Q8N801 248 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 Q8NFD4 153 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 FAM186AA6NE01 2351 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 FREM1Q5H8C1 2179 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 LOC102723996A0A087X1L8 192 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 F6UZH7 168 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 ZIC3O60481 467 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 DKK1O94907 266 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 KRASP01116 189 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 FRMD6-AS1P0C7T7 363 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 COMPP49747 757 aaPredicted RBP18.01■□□□□ 0.47
TRIM3-201ENST00000345851 Q6ZVH6 145 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 CPEB3Q8NE35 698 aaKnown RBP18.01■□□□□ 0.47
TRIM3-201ENST00000345851 BTF3L4Q96K17 158 aa18.01■□□□□ 0.47
TRIM3-201ENST00000345851 MRPL18Q9H0U6 180 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms