RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZBTB34Q8NCN2 500 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 NABP2Q9BQ15 211 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 SOSTQ9BQB4 213 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 ZNF2Q9BSG1 426 aaPredicted RBP9.49□□□□□ -0.89
SNCA-202ENST00000345009 SLC25A33Q9BSK2 321 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 C19orf24Q9BVV8 132 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 MRPL20Q9BYC9 149 aaKnown RBP9.49□□□□□ -0.89
SNCA-202ENST00000345009 PRSS22Q9GZN4 317 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 SLC5A7Q9GZV3 580 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
SNCA-202ENST00000345009 BEX1Q9HBH7 125 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 PRELID3BQ9Y3B1 194 aa9.49□□□□□ -0.89
SNCA-202ENST00000345009 IGHV3-72A0A0B4J1Y9 119 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 NDUFA7O95182 113 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 RAB3DO95716 219 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CT45A5P0DMU8 189 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CT45A7P0DMV0 189 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 AADACP22760 399 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 INPP1P49441 399 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 THBS3P49746 956 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 RAG2P55895 527 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 FXYD4P59646 89 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 RTL8BQ17RB0 113 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CCDC190Q86UF4 302 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CMTM1Q8IZ96 169 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 Q8N402 240 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 ARRDC1Q8N5I2 433 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.48□□□□□ -0.89
SNCA-202ENST00000345009 OR5AN1Q8NGI8 311 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 SECTM1Q8WVN6 248 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 EAF1Q96JC9 268 aaPredicted RBP9.48□□□□□ -0.89
SNCA-202ENST00000345009 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
SNCA-202ENST00000345009 RNF5Q99942 180 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 ZNF251Q9BRH9 671 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 THAP7Q9BT49 309 aaPredicted RBP9.48□□□□□ -0.89
SNCA-202ENST00000345009 SDHAF2Q9NX18 166 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 MOB4Q9Y3A3 225 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 WASHC3Q9Y3C0 194 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 CUBNO60494 3623 aa9.48□□□□□ -0.89
SNCA-202ENST00000345009 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 DISC1C4P0D8 188 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 FGF16O43320 207 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 PEX14O75381 377 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 CD3DP04234 171 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 AKAIN1P0CW23 69 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 FAUP35544 74 aaKnown RBP9.47□□□□□ -0.89
SNCA-202ENST00000345009 ZNF45Q02386 682 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 CNPY1Q3B7I2 92 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 STEAP1BQ6NZ63 245 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 C11orf88Q6PI97 169 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 CCBE1Q6UXH8 406 aaPredicted RBP9.47□□□□□ -0.89
SNCA-202ENST00000345009 ZNF66Q6ZN08 573 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 PDPNQ86YL7 162 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 OR2T6Q8NHC8 308 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 MOB3AQ96BX8 217 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 FLYWCH2Q96CP2 140 aaKnown RBP9.47□□□□□ -0.89
SNCA-202ENST00000345009 KIAA1456Q9P272 454 aa9.47□□□□□ -0.89
SNCA-202ENST00000345009 RBMX2Q9Y388 322 aaKnown RBP9.47□□□□□ -0.89
SNCA-202ENST00000345009 M0QYG6 137 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 TSPAN9O75954 239 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 CD74P04233 296 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 LGALS7P47929 136 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 CATR1Q13166 79 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 GDPD1Q8N9F7 314 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 POC5Q8NA72 575 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 DRAXINQ8NBI3 349 aaPredicted RBP9.46□□□□□ -0.9
SNCA-202ENST00000345009 DEDD2Q8WXF8 326 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 TSNAXQ99598 290 aaKnown RBP9.46□□□□□ -0.9
SNCA-202ENST00000345009 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 C16orf95Q9H693 158 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 SLC35D1Q9NTN3 355 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 PTTG2Q9NZH5 202 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 V9GYH0 126 aa9.46□□□□□ -0.9
SNCA-202ENST00000345009 STAB1Q9NY15 2570 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 IGKV1D-13A0A0B4J2D9 117 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 H0YJW9 148 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 CHST1O43916 411 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 PROP1O75360 226 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 AMY2AP04746 511 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 IGKV1-13P0DP09 117 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 DUTP33316 252 aaKnown RBP9.45□□□□□ -0.9
SNCA-202ENST00000345009 ECI1P42126 302 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 KIR2DS2P43631 304 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 RPS16P62249 146 aaKnown RBP9.45□□□□□ -0.9
SNCA-202ENST00000345009 MMDQ15546 238 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 TRIQKQ629K1 86 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 ZNF660Q6AZW8 331 aaPredicted RBP9.45□□□□□ -0.9
SNCA-202ENST00000345009 C12orf54Q6X4T0 127 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 SLC38A6Q8IZM9 456 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 TOMM5Q8N4H5 51 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 ZNF383Q8NA42 475 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 TERB2Q8NHR7 220 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 TCTEX1D2Q8WW35 142 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 S100ZQ8WXG8 99 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 PRRT1Q99946 306 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 AIFM2Q9BRQ8 373 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 TINAGL1Q9GZM7 467 aaPredicted RBP9.45□□□□□ -0.9
SNCA-202ENST00000345009 CCL28Q9NRJ3 127 aa9.45□□□□□ -0.9
SNCA-202ENST00000345009 SCP2D1Q9UJQ7 156 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms