RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 OR6F1Q8NGZ6 308 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 C5orf30Q96GV9 206 aa16.58■□□□□ 0.24
SMARCB1-202ENST00000344921 FGF16O43320 207 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 THBS3P49746 956 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 F2RL1P55085 397 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 DCTN2Q13561 401 aaKnown RBP16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 DHRS11Q6UWP2 260 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 OR8H1Q8NGG4 311 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 SMIM4Q8WVI0 70 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 SLC5A7Q9GZV3 580 aa16.57■□□□□ 0.24
SMARCB1-202ENST00000344921 CTDSPLO15194 276 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 AMY1AP04745 511 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 AMY2AP04746 511 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 ACTBL2Q562R1 376 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 RITA1Q96K30 269 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 FAM210AQ96ND0 272 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 RASL11BQ9BPW5 248 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 SLC35D1Q9NTN3 355 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 M0QYG6 137 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 IFNA6P05013 189 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 DUTP33316 252 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 CBX3Q13185 183 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 RNASE10Q5GAN6 216 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 ADTRPQ96IZ2 230 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 CCL28Q9NRJ3 127 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 KIAA1456Q9P272 454 aa16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 RBMX2Q9Y388 322 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-202ENST00000344921 CD3DP04234 171 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 CNTFRP26992 372 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 VDAC2P45880 294 aaPredicted RBP16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 TAS2R19P59542 299 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 SSBP1Q04837 148 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 PYDC2Q56P42 97 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 SPANXN2Q5MJ10 180 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 PDPNQ86YL7 162 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 Q8N2B8 174 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 Q8N9W7 124 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 PLSCR3Q9NRY6 295 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 TAS2R8Q9NYW2 309 aa16.55■□□□□ 0.24
SMARCB1-202ENST00000344921 NBR2O15453 112 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 IGLV2-14P01704 120 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 IGKV1-16P04430 117 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 RPS16P62249 146 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 TAGLNQ01995 201 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 RTL8BQ17RB0 113 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 ZNF660Q6AZW8 331 aaPredicted RBP16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 KCTD9Q7L273 389 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 TMEM229BQ8NBD8 167 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 FLYWCH2Q96CP2 140 aaKnown RBP16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 SOSTQ9BQB4 213 aa16.54■□□□□ 0.24
SMARCB1-202ENST00000344921 LINC00473A8K010 186 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 TNFSF12O43508 249 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 VSIG10L2P0DP72 767 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 PROK1P58294 105 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 TMEM95Q3KNT9 176 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 VAX1Q5SQQ9 334 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 BVESQ8NE79 360 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 MOB3AQ96BX8 217 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 HSD17B10Q99714 261 aaKnown RBP16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 TINAGL1Q9GZM7 467 aaPredicted RBP16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 LIN7CQ9NUP9 197 aaKnown RBP16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 PRELID3BQ9Y3B1 194 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 CSF1P09603 554 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 TBPP20226 339 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 PLGLAQ15195 96 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 CCDC190Q86UF4 302 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 OR6Q1Q8NGQ2 317 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 TCTEX1D2Q8WW35 142 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 BORCS5Q969J3 196 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 SERTAD4Q9NUC0 356 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 V9GYH0 126 aa16.53■□□□□ 0.24
SMARCB1-202ENST00000344921 STAB1Q9NY15 2570 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 RAB3DO95716 219 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 RRASP10301 218 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 STEAP1BQ6NZ63 245 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 ZNF818PQ6ZRF7 136 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 ZBTB34Q8NCN2 500 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 WFDC12Q8WWY7 111 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 GPHA2Q96T91 129 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 RNF5Q99942 180 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 ZNF747Q9BV97 191 aa16.52■□□□□ 0.24
SMARCB1-202ENST00000344921 GSTZ1O43708 216 aaPredicted RBP16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 OR2B11Q5JQS5 317 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 ZNF66Q6ZN08 573 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 MFSD4AQ8N468 514 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 KLHDC1Q8N7A1 406 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 NPBQ8NG41 125 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 TSNAXQ99598 290 aaKnown RBP16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 THAP7Q9BT49 309 aaPredicted RBP16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 ZNF107Q9UII5 783 aaPredicted RBP16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 TENM1Q9UKZ4 2725 aa16.51■□□□□ 0.23
SMARCB1-202ENST00000344921 SHOXO15266 292 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 FCGR3BO75015 233 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 MSMO1Q15800 293 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 SLC35E3Q7Z769 313 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 Q8N402 240 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 OR4D10Q8NGI6 311 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 DDB2Q92466 427 aa16.5■□□□□ 0.23
SMARCB1-202ENST00000344921 HARBI1Q96MB7 349 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms