RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 GNG2P59768 71 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 CBX3Q13185 183 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 IDNKQ5T6J7 187 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 PDPNQ86YL7 162 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 MRPL41Q8IXM3 137 aaKnown RBP12.6□□□□□ -0.39
ATG4B-201ENST00000344376 LINC00482Q8N8I6 264 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 OR8U1Q8NH10 309 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 DCUN1D5Q9BTE7 237 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 SPDEFO95238 335 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 CLEC2LP0C7M8 214 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF660Q6AZW8 331 aaPredicted RBP12.6□□□□□ -0.39
ATG4B-201ENST00000344376 TMEM65Q6PI78 240 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 ETV3LQ6ZN32 361 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 C18orf65Q6ZTR6 163 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF383Q8NA42 475 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 ABHD5Q8WTS1 349 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 DCSTAMPQ9H295 470 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 RNF167Q9H6Y7 350 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 GAB2Q9UQC2 676 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 WSB1Q9Y6I7 421 aa12.6□□□□□ -0.39
ATG4B-201ENST00000344376 TMEM235A6NFC5 223 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 TMEM127O75204 238 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 ZNF182P17025 639 aaPredicted RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 RPS16P62249 146 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 DCTN2Q13561 401 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 DPF1Q92782 380 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 FLYWCH2Q96CP2 140 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 MCRIP2Q9BUT9 160 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 ST6GALNAC5Q9BVH7 336 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 SLC35D1Q9NTN3 355 aa12.59□□□□□ -0.39
ATG4B-201ENST00000344376 METTL1Q9UBP6 276 aaKnown RBP12.59□□□□□ -0.39
ATG4B-201ENST00000344376 PROP1O75360 226 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-201ENST00000344376 PSMB8P28062 276 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 ECSCRQ19T08 205 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 CROCCP3Q8IVE0 287 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 NUDCD2Q8WVJ2 157 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 SDHAF2Q9NX18 166 aa12.58□□□□□ -0.4
ATG4B-201ENST00000344376 ELF5Q9UKW6 265 aaPredicted RBP12.58□□□□□ -0.4
ATG4B-201ENST00000344376 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 A0A0A6YYH2 397 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 A6NJ64 397 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 G3V318 75 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 CCL24O00175 119 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 AIREO43918 545 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 IGKV1-16P04430 117 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 CX3CL1P78423 397 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 TMEM267Q0VDI3 215 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-201ENST00000344376 SPCS2Q15005 226 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 PSG5Q15238 335 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 RTL8BQ17RB0 113 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 ZNF260Q3ZCT1 412 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 H1FOOQ8IZA3 346 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-201ENST00000344376 TCTEX1D1Q8N7M0 179 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 C4orf3Q8WVX3 66 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 P2RX4Q99571 388 aa12.57□□□□□ -0.4
ATG4B-201ENST00000344376 IGKV1D-8A0A087WSZ0 117 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 RRASP10301 218 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 PPIFP30405 207 aaKnown RBP12.56□□□□□ -0.4
ATG4B-201ENST00000344376 RAB25P57735 213 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 OR5H6Q8NGV6 325 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 PPP1R14BQ96C90 147 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 ADTRPQ96IZ2 230 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 PALMDQ9NP74 551 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 LGALS7P47929 136 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 CRIP2P52943 208 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-201ENST00000344376 LINC00205P59089 165 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 NDPQ00604 133 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 CNIH2Q6PI25 160 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 DYNC2LI1Q8TCX1 351 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 MRAPQ8TCY5 172 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 SLC25A38Q96DW6 304 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 DUX3Q96PT4 197 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 AURKAIP1Q9NWT8 199 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-201ENST00000344376 SPATA2Q9UM82 520 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 FOXA2Q9Y261 457 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-201ENST00000344376 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
ATG4B-201ENST00000344376 TRAV18A0A075B6X5 111 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 A0A1W2PN81 502 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 FCN1O00602 326 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 SLC25A17O43808 307 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 CA2P00918 260 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 CHRNA7P36544 502 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 LUMP51884 338 aaPredicted RBP12.55□□□□□ -0.4
ATG4B-201ENST00000344376 DEFB136Q30KP8 78 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 ZNF562Q6V9R5 426 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 PPP1R27Q86WC6 154 aa12.55□□□□□ -0.4
ATG4B-201ENST00000344376 MINDY2Q8NBR6 621 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms