RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
TRIO-202ENST00000344204 SHISA3A0PJX4 238 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 ZGLP1P0C6A0 271 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 INSM1Q01101 510 aaPredicted RBP11.85□□□□□ -0.51
TRIO-202ENST00000344204 ZNF260Q3ZCT1 412 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 TMEM177Q53S58 311 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 ZPLD1Q8TCW7 415 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 PGLYRP4Q96LB8 373 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 IL36BQ9NZH7 164 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 HIST1H1AQ02539 215 aaPredicted RBP11.85□□□□□ -0.51
TRIO-202ENST00000344204 C1orf100Q5SVJ3 147 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 GNG3P63215 75 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
TRIO-202ENST00000344204 RPRMQ9NS64 109 aa11.85□□□□□ -0.51
TRIO-202ENST00000344204 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 ZNF205O95201 554 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 YPEL5P62699 121 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 FXYD3Q14802 87 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 C6orf106Q9H6K1 298 aaPredicted RBP11.84□□□□□ -0.51
TRIO-202ENST00000344204 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
TRIO-202ENST00000344204 TMEM186Q96B77 213 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 NHSL1Q5SYE7 1610 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 RTL10Q7L3V2 364 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 ALKBH3Q96Q83 286 aaPredicted RBP11.84□□□□□ -0.51
TRIO-202ENST00000344204 HDHD3Q9BSH5 251 aaPredicted RBP11.84□□□□□ -0.51
TRIO-202ENST00000344204 TRAV38-1A0A0B4J264 116 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 CD40P25942 277 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 FAM19A2Q8N3H0 131 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 PXMP4Q9Y6I8 212 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 ORM1P02763 201 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 CD1BP29016 333 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 HILPDAQ9Y5L2 63 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 IGHV3-9P01782 118 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 SPSB4Q96A44 273 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 PTPN13Q12923 2485 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 F11P03951 625 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 HOXC4P09017 264 aaPredicted RBP11.84□□□□□ -0.51
TRIO-202ENST00000344204 TEPPQ6URK8 271 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 PERPQ96FX8 193 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 CD207Q9UJ71 328 aa11.84□□□□□ -0.51
TRIO-202ENST00000344204 CST9LQ9H4G1 147 aa11.83□□□□□ -0.51
TRIO-202ENST00000344204 DRD1P21728 446 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CSRP3P50461 194 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 VN1R2Q8NFZ6 395 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CXorf51AA0A1B0GTR3 108 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CEACAM1P13688 526 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CXorf66Q5JRM2 361 aaPredicted RBP11.83□□□□□ -0.52
TRIO-202ENST00000344204 ZNF502Q8TBZ5 544 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CHODLQ9H9P2 273 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 SDF2L1Q9HCN8 221 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 THYN1Q9P016 225 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 TNFSF11O14788 317 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 OR2K2Q8NGT1 345 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 PRKNO60260 465 aaPredicted RBP11.83□□□□□ -0.52
TRIO-202ENST00000344204 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 ATG4DQ86TL0 474 aaPredicted RBP11.83□□□□□ -0.52
TRIO-202ENST00000344204 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 TRBV24-1A0A075B6N3 115 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
TRIO-202ENST00000344204 KCNE4Q8WWG9 221 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 ADRA2AP08913 450 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 IGFBP4P22692 258 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 ZNF683Q8IZ20 524 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 SNRNP40Q96DI7 357 aaKnown RBP11.83□□□□□ -0.52
TRIO-202ENST00000344204 C2orf16Q68DN1 1984 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 NEUROG1Q92886 237 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 TRGV10A0A0A0MS01 117 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 HBBP68871 147 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 TMEM187Q14656 261 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 CHRNA10Q9GZZ6 450 aa11.83□□□□□ -0.52
TRIO-202ENST00000344204 RBP4P02753 201 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 C1QCP02747 245 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 ORM2P19652 201 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 DHHO43323 396 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 GAB4Q2WGN9 574 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 PSMG4Q5JS54 123 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 CSPG4Q6UVK1 2322 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 PIN1P1O15428 100 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 FAM53BQ14153 422 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 CEACAM16Q2WEN9 425 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 H1FXQ92522 213 aaKnown RBP11.82□□□□□ -0.52
TRIO-202ENST00000344204 NR2C2APQ86WQ0 139 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 SCCPDHQ8NBX0 429 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 NAT6Q93015 286 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 FOXQ1Q9C009 403 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 ZNF831Q5JPB2 1677 aa11.82□□□□□ -0.52
TRIO-202ENST00000344204 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 LYZP61626 148 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 TSPOP30536 169 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 ADMP35318 185 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 SAMD5Q5TGI4 173 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 SPANXA1Q9NS26 97 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 MGAT2Q10469 447 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 DECR2Q9NUI1 292 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 IGHV3-15A0A0B4J1V0 119 aa11.81□□□□□ -0.52
TRIO-202ENST00000344204 NGFP01138 241 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms