RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 K7EM74 188 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 TMEM14EPQ6UXP3 125 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 MBD3L2Q8NHZ7 208 aaPredicted RBP12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 C12orf57Q99622 126 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 C15orf65H3BRN8 121 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 P0C879 139 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 EIF2S3LQ2VIR3 472 aaKnown RBP12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF343Q6P1L6 599 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 DTD1Q8TEA8 209 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 LURAP1Q96LR2 239 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 FAM215AQ9Y5M1 114 aa12.41□□□□□ -0.42
VIPAS39-202ENST00000343765 PLCE1Q9P212 2302 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 NBASA2RRP1 2371 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 POLEQ07864 2286 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF98A6NK75 572 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 PPIHO43447 177 aaKnown RBP12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 ZNF737O75373 536 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 CEACAM4O75871 244 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 SELLP14151 372 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 GPR12P47775 334 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 KHDC3LQ587J8 217 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 NCR3LG1Q68D85 454 aa12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 PSMG3Q9BT73 122 aaPredicted RBP12.4□□□□□ -0.42
VIPAS39-202ENST00000343765 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 CLDN14O95500 239 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 BCL2P10415 239 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 RNF212Q495C1 297 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 TMEM41BQ5BJD5 291 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 ZNF561Q8N587 486 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 GCSAMQ8N6F7 178 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 AGMATQ9BSE5 352 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.43
VIPAS39-202ENST00000343765 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 SRRM5B3KS81 715 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 FCGR3BO75015 233 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 IGKV1D-33P01593 117 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 IGKV1-33P01594 117 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 CRYAAP02489 173 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 TUBG1P23258 451 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 LEAP2Q969E1 77 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 TVP23CQ96ET8 276 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 SLC25A22Q9H936 323 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 TUBG2Q9NRH3 451 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 TRAV1-1A0A0B4J248 108 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 AGAP20933 346 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 FGF7P21781 194 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 KLF3P57682 345 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 TFF3Q07654 80 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 MZT1Q08AG7 82 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 RPL39P5Q59GN2 51 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 VKORC1L1Q8N0U8 176 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 ITLN1Q8WWA0 313 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 WASF3Q9UPY6 502 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 PTPRBP23467 1997 aa12.39□□□□□ -0.43
VIPAS39-202ENST00000343765 SERF2P84101 59 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 UTF1Q5T230 341 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 ACSM6Q6P461 480 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 R3HDM4Q96D70 268 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 MUCL1Q96DR8 90 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 HSD17B10Q99714 261 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 QTRT1Q9BXR0 403 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 M0R1X1 148 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 TM4SF5O14894 197 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 RAB29O14966 203 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 DEFA4P12838 97 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 ZNF66Q6ZN08 573 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 IQCF2Q8IXL9 164 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 MEGF10Q96KG7 1140 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 SLC39A9Q9NUM3 307 aa12.38□□□□□ -0.43
VIPAS39-202ENST00000343765 PROP1O75360 226 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 IFNA17P01571 189 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 ADH4P08319 380 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 OR9G9P0C7N8 305 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 DUX4L9Q6RFH8 374 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 LHX4Q969G2 390 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 TOLLIPQ9H0E2 274 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 TMPRSS5Q9H3S3 457 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 KLK10O43240 276 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 OR8U8P0C7N1 319 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 TIMM23BQ5SRD1 257 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 FAM90A2PQ658T7 463 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 RBMS3Q6XE24 437 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 C22orf34Q6ZV56 151 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 DEFB108BQ8NET1 73 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 MBD3L1Q8WWY6 194 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 TMEM147Q9BVK8 224 aa12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 CISD1Q9NZ45 108 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-202ENST00000343765 BMP5P22003 454 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 DUTP33316 252 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 HTD2P86397 168 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 FABP9Q0Z7S8 132 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 MORN2Q502X0 79 aa12.36□□□□□ -0.43
VIPAS39-202ENST00000343765 C1orf185Q5T7R7 199 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms