RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
MUC1-204ENST00000343256 PRSS29PA6NIE9 313 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 PDCD6O75340 191 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 CRTAPO75718 401 aaPredicted RBP13.09□□□□□ -0.31
MUC1-204ENST00000343256 TUSC2O75896 110 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 IFNA4P05014 189 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 GLAP06280 429 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 IGFBP3P17936 291 aaPredicted RBP13.09□□□□□ -0.31
MUC1-204ENST00000343256 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
MUC1-204ENST00000343256 ATP6AP1Q15904 470 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 ANKRD55Q3KP44 614 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 AWAT2Q6E213 333 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 BTNL8Q6UX41 500 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 AMIGO2Q86SJ2 522 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 OR13C5Q8NGS8 318 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 Q96M66 194 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 SULT4A1Q9BR01 284 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 ERVK13-1Q9NX77 482 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 OR1A1Q9P1Q5 309 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 HSPG2P98160 4391 aa13.09□□□□□ -0.31
MUC1-204ENST00000343256 TMEM213A2RRL7 107 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 FAM90A7PA6NKC0 464 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 FAM223BA6NKX1 122 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 LGALS9O00182 355 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 APOA2P02652 100 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 RPL35AP18077 110 aaKnown RBP13.08□□□□□ -0.32
MUC1-204ENST00000343256 FCGR2BP31994 310 aaPredicted RBP13.08□□□□□ -0.32
MUC1-204ENST00000343256 MRPL28Q13084 256 aaKnown RBP13.08□□□□□ -0.32
MUC1-204ENST00000343256 MRGPRG-AS1Q2M3A8 158 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 FAM223AQ8IWN6 122 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 JAGN1Q8N5M9 183 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 STPG3Q8N7X2 389 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 UXS1Q8NBZ7 420 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 C2CD4CQ8TF44 421 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 SLC35D1Q9NTN3 355 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 APLNQ9ULZ1 77 aa13.08□□□□□ -0.32
MUC1-204ENST00000343256 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 UBE2CO00762 179 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 MPPED1O15442 326 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 GGCTO75223 188 aaKnown RBP13.07□□□□□ -0.32
MUC1-204ENST00000343256 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 GVQW1Q8N7I0 195 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 OR1L6Q8NGR2 347 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
MUC1-204ENST00000343256 FAAP24Q9BTP7 215 aa13.07□□□□□ -0.32
MUC1-204ENST00000343256 ZNF320A2RRD8 509 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 SRRM4A7MD48 611 aaKnown RBP13.06□□□□□ -0.32
MUC1-204ENST00000343256 IGLL5B9A064 214 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 OR2J3O76001 311 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 CEACAM6P40199 344 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 TNXAQ16473 311 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 C15orf32Q32M92 178 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 SLC25A30Q5SVS4 291 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 SVOPQ8N4V2 548 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 AMBNQ9NP70 447 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 POMPQ9Y244 141 aa13.06□□□□□ -0.32
MUC1-204ENST00000343256 M0R1X1 148 aa13.05□□□□□ -0.32
MUC1-204ENST00000343256 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
MUC1-204ENST00000343256 SNRPGP62308 76 aaKnown RBP13.05□□□□□ -0.32
MUC1-204ENST00000343256 ZNF575Q86XF7 245 aa13.05□□□□□ -0.32
MUC1-204ENST00000343256 SRSF12Q8WXF0 261 aaKnown RBP13.05□□□□□ -0.32
MUC1-204ENST00000343256 MYCBPQ99417 103 aaPredicted RBP13.05□□□□□ -0.32
MUC1-204ENST00000343256 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
MUC1-204ENST00000343256 S4R3C0 116 aa13.05□□□□□ -0.32
MUC1-204ENST00000343256 KIR2DL5BA0A0G2JN68 375 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 KIR2DL5BA0A0G2JPC4 375 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 RTL8CO15255 209 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 CAPGP40121 348 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 RBPMS2Q6ZRY4 209 aaKnown RBP13.04□□□□□ -0.32
MUC1-204ENST00000343256 C6orf201Q7Z4U5 140 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 GPHB5Q86YW7 130 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 KIR2DL5AQ8N109 375 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 KIR2DL5BQ8NHK3 375 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 EDARADDQ8WWZ3 215 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 MFFQ9GZY8 342 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 FBXL7Q9UJT9 491 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 ZNF221Q9UK13 617 aa13.04□□□□□ -0.32
MUC1-204ENST00000343256 EXOSC1Q9Y3B2 195 aaKnown RBP13.04□□□□□ -0.32
MUC1-204ENST00000343256 A0A1W2PPK0 400 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 S1PR2O95136 353 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 TCTAP57738 103 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 RPL22L1Q6P5R6 122 aaKnown RBP13.03□□□□□ -0.32
MUC1-204ENST00000343256 IDO2Q6ZQW0 420 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 OR2C3Q8N628 320 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 NECAP1Q8NC96 275 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 ACOT12Q8WYK0 555 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 NEDD4LQ96PU5 975 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
MUC1-204ENST00000343256 SNTNA6NMZ2 147 aa13.02□□□□□ -0.33
MUC1-204ENST00000343256 DEFB4AO15263 64 aa13.02□□□□□ -0.33
MUC1-204ENST00000343256 SHOXO15266 292 aa13.02□□□□□ -0.33
MUC1-204ENST00000343256 ZBTB25P24278 435 aa13.02□□□□□ -0.33
MUC1-204ENST00000343256 ARL3P36405 182 aa13.02□□□□□ -0.33
MUC1-204ENST00000343256 ZNF880Q6PDB4 577 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms