RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 HLA-DRB5Q30154 266 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.61
PMS1-201ENST00000342075 C13orf42A0A1B0GVH6 325 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 M0R1W7 72 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 TOR1AO14656 332 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 FCGR3BO75015 233 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 CT45A6P0DMU7 189 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 CT45A5P0DMU8 189 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 CT45A7P0DMV0 189 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 PRTN3P24158 256 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
PMS1-201ENST00000342075 AKAP14Q86UN6 197 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 DYNAPQ8N1N2 210 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 GALNT14Q96FL9 552 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 OR10C1Q96KK4 312 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 MTORP42345 2549 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 S1PR2O95136 353 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 CD24P25063 80 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 RAB7AP51149 207 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 BRD3OSQ6XYD6 125 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 SPAG16Q8N0X2 631 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 AKR1E2Q96JD6 320 aa11.26□□□□□ -0.61
PMS1-201ENST00000342075 NKX2-5P52952 324 aaPredicted RBP11.25□□□□□ -0.61
PMS1-201ENST00000342075 TMEM249Q2WGJ8 235 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 LIAT1Q6ZQX7 453 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 ST6GALNAC6Q969X2 333 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 H0Y980 276 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 BUB1B-PAK6H3BSN5 160 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 TGFAP01135 160 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 IGHV4-31P0DP07 118 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 PIPOXQ9P0Z9 390 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 KCNIP3Q9Y2W7 256 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 KPTNQ9Y664 436 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 TRAV40A0A0B4J280 105 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 LRRC37A5PQ49AS3 106 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 ZNF833PQ6ZTB9 187 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 SSX9Q7RTT3 188 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 SELENOHQ8IZQ5 122 aaKnown RBP11.25□□□□□ -0.61
PMS1-201ENST00000342075 RITA1Q96K30 269 aa11.25□□□□□ -0.61
PMS1-201ENST00000342075 hCG_1809904A0A1W2PP81 198 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 A0A1W2PPE2 198 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 A0A1W2PR64 198 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 A0A1W2PRV1 198 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 B4DSR2 109 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 RBP4P02753 201 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 UCP1P25874 307 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 G6PCP35575 357 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 LPAR6P43657 344 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 PAX8Q06710 450 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 DDB2Q92466 427 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 C7orf69Q9H7B7 122 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
PMS1-201ENST00000342075 HIVEP1P15822 2718 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 KRASP01116 189 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 EPHA1P21709 976 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 LOXL1Q08397 574 aaPredicted RBP11.24□□□□□ -0.61
PMS1-201ENST00000342075 OR13D1Q8NGV5 346 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 COQ8AQ8NI60 647 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 ZNF596Q8TC21 504 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 TMEM186Q96B77 213 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 C18orf12Q96KH6 178 aa11.24□□□□□ -0.61
PMS1-201ENST00000342075 ZNF436Q9C0F3 470 aaPredicted RBP11.24□□□□□ -0.61
PMS1-201ENST00000342075 CENPVL3A0A0U1RRI6 287 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 C5orf51A6NDU8 294 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 ODF3BA8MYP8 253 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 CDS2O95674 445 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 IGKV1-5P01602 117 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 SERPINE2P07093 398 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 SSX2Q16385 188 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 ZNF695Q8IW36 515 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 KIR3DL3Q8N743 410 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 OR5M8Q8NGP6 311 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 LIN7CQ9NUP9 197 aaKnown RBP11.23□□□□□ -0.61
PMS1-201ENST00000342075 KCNAB3O43448 404 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 CRYZL1O95825 349 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 ANXA3P12429 323 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 RAB13P51153 203 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 LINC00311Q8N616 119 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 OR11H6Q8NGC7 330 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 S1PR3Q99500 378 aa11.23□□□□□ -0.61
PMS1-201ENST00000342075 HSD17B10Q99714 261 aaKnown RBP11.23□□□□□ -0.61
PMS1-201ENST00000342075 TET2Q6N021 2002 aaPredicted RBP11.23□□□□□ -0.61
PMS1-201ENST00000342075 G3V3Q6 166 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 S100GP29377 79 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 Q6ZRM9 215 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 C22orf15Q8WYQ4 148 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 GSKIPQ9P0R6 139 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 TGIF2LXQ8IUE1 241 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 AJUBAQ96IF1 538 aa11.22□□□□□ -0.61
PMS1-201ENST00000342075 NABP2Q9BQ15 211 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms