RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 PGA5P0DJD9 388 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 RANP62826 216 aaKnown RBP16.5■□□□□ 0.23
CDK13-202ENST00000340829 COL4A6Q14031 1691 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 LPAR2Q9HBW0 351 aa16.5■□□□□ 0.23
CDK13-202ENST00000340829 LGALS7P47929 136 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 OR1L6Q8NGR2 347 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 PERPQ96FX8 193 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 DIRC2Q96SL1 478 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 IL36RNQ9UBH0 155 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 FREM3P0C091 2139 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 IGKV1-9A0A0C4DH69 117 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 MEF2BQ02080 365 aaPredicted RBP16.49■□□□□ 0.23
CDK13-202ENST00000340829 SLC25A28Q96A46 364 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 TMEM140Q9NV12 185 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 CLEC5AQ9NY25 188 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 F2RL2O00254 374 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 PTGDSP41222 190 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 C1QTNF12Q5T7M4 302 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 C1QTNF5Q9BXJ0 243 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 MGAMO43451 1857 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 SMUG1Q53HV7 270 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 VKORC1L1Q8N0U8 176 aa16.49■□□□□ 0.23
CDK13-202ENST00000340829 TCF20Q9UGU0 1960 aaKnown RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 FNDC1Q4ZHG4 1894 aaPredicted RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 NDUFB4O95168 129 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 HSPB1P04792 205 aaKnown RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 DANCRP0C864 163 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 HNRNPA3P51991 378 aaKnown RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 MIC13Q5XKP0 118 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 OR10S1Q8NGN2 331 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 PRSS3P2Q8NHM4 247 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 EFNA2O43921 213 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 GOSR1O95249 250 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 MMP7P09237 267 aaPredicted RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 IER3P46695 156 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 RND3P61587 244 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 FAM222BQ8WU58 562 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 ZDHHC8Q9ULC8 765 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 MDC1Q14676 2089 aaKnown RBP16.48■□□□□ 0.23
CDK13-202ENST00000340829 CSN3P07498 182 aa16.48■□□□□ 0.23
CDK13-202ENST00000340829 SMPD2O60906 423 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 LYZL4Q96KX0 146 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 PCGF1Q9BSM1 259 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 REPIN1Q9BWE0 567 aaKnown RBP16.47■□□□□ 0.23
CDK13-202ENST00000340829 DEPPQ9NTK1 212 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 DHRS11Q6UWP2 260 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 ZNRF1Q8ND25 227 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 IGLV3-32A0A0A0MS00 114 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 TRAV14DV4A0A0A6YYC5 116 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 FAM90A26D6RGX4 464 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 KLF7O75840 302 aaPredicted RBP16.47■□□□□ 0.23
CDK13-202ENST00000340829 P01737 135 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 COL8A1P27658 744 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 C11orf42Q8N5U0 333 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 TMEM105Q8N8V8 129 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 C1RLQ9NZP8 487 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 RPL29P47914 159 aaKnown RBP16.47■□□□□ 0.23
CDK13-202ENST00000340829 SGMS2Q8NHU3 365 aa16.47■□□□□ 0.23
CDK13-202ENST00000340829 TRAV34A0A0B4J273 112 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 HCP5Q6MZN7 132 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 OR8I2Q8N0Y5 310 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 LSM10Q969L4 123 aaKnown RBP16.46■□□□□ 0.23
CDK13-202ENST00000340829 TNFRSF19Q9NS68 423 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 IDI2-AS1Q9NZ38 188 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 CISD1Q9NZ45 108 aaKnown RBP16.46■□□□□ 0.23
CDK13-202ENST00000340829 NAGKQ9UJ70 344 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 HILPDAQ9Y5L2 63 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 RIF1Q5UIP0 2472 aaKnown RBP16.46■□□□□ 0.23
CDK13-202ENST00000340829 CEACAM18A8MTB9 384 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 SNURFLB1AK76 121 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 NEURL1O76050 574 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 SMIM17P0DL12 118 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 RNF222A6NCQ9 220 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 C9orf172C9J069 976 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 MPDU1O75352 247 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 RPL27AP46776 148 aaKnown RBP16.46■□□□□ 0.23
CDK13-202ENST00000340829 HLA-DRB5Q30154 266 aa16.46■□□□□ 0.23
CDK13-202ENST00000340829 C17orf82Q86X59 251 aaPredicted RBP16.46■□□□□ 0.23
CDK13-202ENST00000340829 IGSF23A1L1A6 192 aa16.46■□□□□ 0.22
CDK13-202ENST00000340829 J3QW42 95 aa16.46■□□□□ 0.22
CDK13-202ENST00000340829 CECR9P0C854 216 aa16.46■□□□□ 0.22
CDK13-202ENST00000340829 Q8WTZ3 238 aa16.46■□□□□ 0.22
CDK13-202ENST00000340829 PAXXQ9BUH6 204 aa16.46■□□□□ 0.22
CDK13-202ENST00000340829 PROB1E7EW31 1015 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 SMIM6P0DI80 62 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 RPL8P62917 257 aaKnown RBP16.45■□□□□ 0.22
CDK13-202ENST00000340829 PAQR4Q8N4S7 273 aaPredicted RBP16.45■□□□□ 0.22
CDK13-202ENST00000340829 RAB24Q969Q5 203 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 JPT1Q9UK76 154 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 CACNA1DQ01668 2161 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 IL19Q9UHD0 177 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 PLAUP00749 431 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 CLPSP04118 112 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 TMEM183BQ1AE95 376 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 ABLIM2Q6H8Q1 611 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 SSX8Q7RTT4 187 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 PTBP3O95758 552 aaKnown RBP16.45■□□□□ 0.22
CDK13-202ENST00000340829 ZFP36L1Q07352 338 aaKnown RBP16.45■□□□□ 0.22
CDK13-202ENST00000340829 STXBP6Q8NFX7 210 aa16.45■□□□□ 0.22
CDK13-202ENST00000340829 GPR179Q6PRD1 2367 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms