RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 HIST1H1BP16401 226 aaKnown RBP12.14□□□□□ -0.47
CPSF7-201ENST00000340437 COL8A2P25067 703 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 PRAMEF6Q5VXH4 476 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
CPSF7-201ENST00000340437 SLC25A40Q8TBP6 338 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 IL22RA2Q969J5 263 aa12.14□□□□□ -0.47
CPSF7-201ENST00000340437 IGF2RP11717 2491 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 GZMHP20718 246 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 TNFRSF9Q07011 255 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 PNRC1Q12796 327 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-201ENST00000340437 Q3ZCU0 254 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 H2BFWTQ7Z2G1 175 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 TECTAO75443 2155 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 B4DEV8 164 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 SSTR5P35346 364 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 Q6P435 159 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 GALMQ96C23 342 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 OPA3Q9H6K4 179 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 TNFSF15O95150 251 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 MAS1LP35410 378 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 PPP1CBP62140 327 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 Q6ZS49 121 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 C1orf210Q8IVY1 113 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 TMEM45BQ96B21 275 aa12.13□□□□□ -0.47
CPSF7-201ENST00000340437 ODAMA1E959 279 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 IL18BPO95998 194 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 DDTP30046 118 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 MPLP40238 635 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 RPL23P62829 140 aaKnown RBP12.12□□□□□ -0.47
CPSF7-201ENST00000340437 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 DPPA3Q6W0C5 159 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 DTD1Q8TEA8 209 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 A0A1B0GUS0 222 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 HAND1O96004 215 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 IFNA10P01566 189 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 CYC1P08574 325 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 SERF2P84101 59 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 SLC10A1Q14973 349 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 FAM78BQ5VT40 261 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 Q8NFD4 153 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 SNRPCP09234 159 aaKnown RBP12.12□□□□□ -0.47
CPSF7-201ENST00000340437 MSMO1Q15800 293 aa12.12□□□□□ -0.47
CPSF7-201ENST00000340437 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-201ENST00000340437 GYPAP02724 150 aa12.11□□□□□ -0.47
CPSF7-201ENST00000340437 DCAF10Q5QP82 559 aa12.11□□□□□ -0.47
CPSF7-201ENST00000340437 MBD3L1Q8WWY6 194 aa12.11□□□□□ -0.47
CPSF7-201ENST00000340437 LSM10Q969L4 123 aaKnown RBP12.11□□□□□ -0.47
CPSF7-201ENST00000340437 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
CPSF7-201ENST00000340437 C12orf77C9JDV5 145 aa12.11□□□□□ -0.47
CPSF7-201ENST00000340437 GATCO43716 136 aaKnown RBP12.11□□□□□ -0.47
CPSF7-201ENST00000340437 HBZP02008 142 aa12.11□□□□□ -0.47
CPSF7-201ENST00000340437 ZNF320A2RRD8 509 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 SLC25A6P12236 298 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 DERL1Q9BUN8 251 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 LINC00470Q9BZP3 86 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 PITPNC1Q9UKF7 332 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 IGKV3D-15A0A087WSY6 115 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 C9orf172C9J069 976 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 C11orf94C9JXX5 98 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 SCGB1D1O95968 90 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 ZNF497Q6ZNH5 498 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-201ENST00000340437 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-201ENST00000340437 METRNQ9UJH8 293 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 AMBPP02760 352 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 NDUFB7P17568 137 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 MPV17P39210 176 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 NANOS1Q8WY41 292 aaKnown RBP12.1□□□□□ -0.47
CPSF7-201ENST00000340437 POLDIP2Q9Y2S7 368 aa12.1□□□□□ -0.47
CPSF7-201ENST00000340437 CD33P20138 364 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 COX5AP20674 150 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 OR1P1Q8NH06 330 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 PSMG3Q9BT73 122 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-201ENST00000340437 TLN1Q9Y490 2541 aaKnown RBP12.09□□□□□ -0.47
CPSF7-201ENST00000340437 FCGR3BO75015 233 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 KBTBD11O94819 623 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 NDUFB4O95168 129 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 ATP5G3P48201 142 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 MRPL49Q13405 166 aaKnown RBP12.09□□□□□ -0.47
CPSF7-201ENST00000340437 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 DUSP13Q9UII6 198 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 ZFHX4Q86UP3 3567 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 THBS3P49746 956 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 PSG7Q13046 419 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 GNG12Q9UBI6 72 aa12.09□□□□□ -0.47
CPSF7-201ENST00000340437 RNF212BA8MTL3 300 aa12.08□□□□□ -0.48
CPSF7-201ENST00000340437 TIMM8AO60220 97 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms