RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 HEATR1Q9H583 2144 aaKnown RBP13.67□□□□□ -0.22
CCNY-202ENST00000339497 PINLYPA6NC86 204 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 HOXA6P31267 233 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 NTN3O00634 580 aaPredicted RBP13.67□□□□□ -0.22
CCNY-202ENST00000339497 CELA3BP08861 270 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 HOXD4P09016 255 aaPredicted RBP13.67□□□□□ -0.22
CCNY-202ENST00000339497 CSRP2Q16527 193 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 TAF15Q92804 592 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■■■ 27
CCNY-202ENST00000339497 NPVFQ9HCQ7 196 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 NOTCH3Q9UM47 2321 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 MARCH11A6NNE9 402 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 SLC31A2O15432 143 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 ZG16O60844 167 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 TPPP2P59282 170 aa13.67□□□□□ -0.22
CCNY-202ENST00000339497 LHX2P50458 406 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 TOMM20LQ6UXN7 152 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 VKORC1L1Q8N0U8 176 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 GNG7O60262 68 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 WNT5AP41221 380 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 CLDN18P56856 261 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 TMUB1Q9BVT8 246 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 ZNF716A6NP11 495 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 PTGDSP41222 190 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 SPCS3P61009 180 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 FAM27E3Q08E93 113 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 PSG7Q13046 419 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 FGFBP3Q8TAT2 258 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 HEXA-AS1Q9H8Q6 139 aa13.66□□□□□ -0.22
CCNY-202ENST00000339497 TNFRSF9Q07011 255 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 PXMP4Q9Y6I8 212 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 ARL2-SNX15V9GYD0 113 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 B4DEV8 164 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 SMPD2O60906 423 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 MEOX2P50222 304 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 FOXG1P55316 489 aaPredicted RBP13.65□□□□□ -0.22
CCNY-202ENST00000339497 SUMO1P63165 101 aaKnown RBP13.65□□□□□ -0.22
CCNY-202ENST00000339497 PRO1933Q9H354 126 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 CISD1Q9NZ45 108 aaKnown RBP13.65□□□□□ -0.22
CCNY-202ENST00000339497 H0YL77 283 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 NEURL1O76050 574 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 ZIC4Q8N9L1 334 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 FAM216AQ8WUB2 273 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 VOPP1Q96AW1 172 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 MS4A10Q96PG2 267 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 FAM201AQ5SY85 155 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 ABLIM2Q6H8Q1 611 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 WBP1Q96G27 269 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 RARRES2Q99969 163 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 ASCL3Q9NQ33 180 aa13.65□□□□□ -0.22
CCNY-202ENST00000339497 USF3Q68DE3 2245 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 TRAV14DV4A0A0A6YYC5 116 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 RNF222A6NCQ9 220 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 LRRC3CA6NJW4 275 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 OR10J1P30954 320 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 GCSAMQ8N6F7 178 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 HELTA6NFD8 242 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 CXorf1O96002 111 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 RPEL1Q2QD12 228 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 NOL4LQ96MY1 436 aaPredicted RBP13.64□□□□□ -0.23
CCNY-202ENST00000339497 PCGF1Q9BSM1 259 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 FUT9Q9Y231 359 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 S100A4P26447 101 aaKnown RBP13.64□□□□□ -0.23
CCNY-202ENST00000339497 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
CCNY-202ENST00000339497 SSX7Q7RTT5 188 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 IL22RA2Q969J5 263 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 SRD5A3Q9H8P0 318 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 GP6Q9HCN6 339 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
CCNY-202ENST00000339497 TRAV20A0A0B4J274 112 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
CCNY-202ENST00000339497 COA4Q9NYJ1 87 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 ANAPC1Q9H1A4 1944 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 SEC14L6B5MCN3 397 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 IGHV1-2P23083 117 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 C10orf113Q5VZT2 155 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 MIC13Q5XKP0 118 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 HCP5Q6MZN7 132 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 MRPL54Q6P161 138 aaKnown RBP13.63□□□□□ -0.23
CCNY-202ENST00000339497 DHRS11Q6UWP2 260 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 LDLRAD3Q86YD5 345 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 GALNT14Q96FL9 552 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 RND3P61587 244 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 PLAURQ03405 335 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 TCTEX1D1Q8N7M0 179 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 WDYHV1Q96HA8 205 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 RASL11BQ9BPW5 248 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 SIRT7Q9NRC8 400 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 ZDHHC8Q9ULC8 765 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■□□ 17.5
CCNY-202ENST00000339497 PDE6DO43924 150 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 SRSF10O75494 262 aaKnown RBP13.63□□□□□ -0.23
CCNY-202ENST00000339497 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 ABHD12Q8N2K0 398 aa13.63□□□□□ -0.23
CCNY-202ENST00000339497 RNF2Q99496 336 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms