RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 HDHD3Q9BSH5 251 aaPredicted RBP11.99□□□□□ -0.49
LINC01116-202ENST00000339037 LPAR5Q9H1C0 372 aa11.99□□□□□ -0.49
LINC01116-202ENST00000339037 CHMP1AQ9HD42 196 aaPredicted RBP11.99□□□□□ -0.49
LINC01116-202ENST00000339037 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
LINC01116-202ENST00000339037 TPRKBQ9Y3C4 175 aa11.99□□□□□ -0.49
LINC01116-202ENST00000339037 A8MZ25 164 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 SOCS1O15524 211 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 RGS10O43665 173 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 CA2P00918 260 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 TRGV3P03979 118 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 ZP3P21754 424 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 TPBGQ13641 420 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 MOB1BQ7L9L4 216 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 OR5AN1Q8NGI8 311 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 SETD6Q8TBK2 473 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 ABHD14BQ96IU4 210 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 RNF5Q99942 180 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 AGMATQ9BSE5 352 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 PARP12Q9H0J9 701 aaKnown RBP11.98□□□□□ -0.49
LINC01116-202ENST00000339037 PLGRKTQ9HBL7 147 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 C19orf73Q9NVV2 129 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 AK3Q9UIJ7 227 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 AK6Q9Y3D8 172 aaKnown RBP11.98□□□□□ -0.49
LINC01116-202ENST00000339037 TNCP24821 2201 aa11.98□□□□□ -0.49
LINC01116-202ENST00000339037 FOXI3A8MTJ6 420 aaPredicted RBP11.97□□□□□ -0.49
LINC01116-202ENST00000339037 SLC17A2O00624 439 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 ARSBP15848 533 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 VEGFCP49767 419 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 PSG5Q15238 335 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 GRPEL2Q8TAA5 225 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 CCDC90BQ9GZT6 254 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 RANGRFQ9HD47 186 aaPredicted RBP11.97□□□□□ -0.49
LINC01116-202ENST00000339037 PLEKHJ1Q9NW61 149 aa11.97□□□□□ -0.49
LINC01116-202ENST00000339037 ITGB1BP1O14713 200 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 SPDEFO95238 335 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 IGKV1-16P04430 117 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 CPEP16870 476 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 CRHBPP24387 322 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 MAP2K4P45985 399 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 CLDN12P56749 244 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 FABP5Q01469 135 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 MLLT11Q13015 90 aaPredicted RBP11.96□□□□□ -0.49
LINC01116-202ENST00000339037 ADAMTSL5Q6ZMM2 481 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 FAM89BQ8N5H3 189 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 DRAXINQ8NBI3 349 aaPredicted RBP11.96□□□□□ -0.49
LINC01116-202ENST00000339037 TSNAXQ99598 290 aaKnown RBP11.96□□□□□ -0.49
LINC01116-202ENST00000339037 SPATA25Q9BR10 227 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 ZNF355PQ9NSJ1 428 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.49
LINC01116-202ENST00000339037 PLECQ15149 4684 aaKnown RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 TRBV6-6A0A0A6YYG2 114 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 A0A0G2JLM5 398 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 C13orf42A0A1B0GVH6 325 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 ARL6IP5O75915 188 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 LORP23490 312 aaPredicted RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 ZBTB25P24278 435 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 CALRP27797 417 aaKnown RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 TMEM50BP56557 158 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 HLA-DRB3P79483 266 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 TRAM1Q15629 374 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 RAB11BQ15907 218 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 POC5Q8NA72 575 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 MGLLQ99685 303 aa11.95□□□□□ -0.5
LINC01116-202ENST00000339037 URM1Q9BTM9 101 aaKnown RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 C11orf54Q9H0W9 315 aaPredicted RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 RIMS4Q9H426 269 aaPredicted RBP11.95□□□□□ -0.5
LINC01116-202ENST00000339037 ANKRD34BA5PLL1 514 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 H0Y980 276 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 H3BUA1 57 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 SLC25A17O43808 307 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 PSMA1P25786 263 aaKnown RBP11.94□□□□□ -0.5
LINC01116-202ENST00000339037 CEACAM6P40199 344 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 RPS16P62249 146 aaKnown RBP11.94□□□□□ -0.5
LINC01116-202ENST00000339037 PLA2G7Q13093 441 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 FXYD3Q14802 87 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 MOGAT2Q3SYC2 334 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 OR9G4Q8NGQ1 327 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 ARHGAP5-AS1Q96IT6 56 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 PECRQ9BY49 303 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 HSF4Q9ULV5 492 aa11.94□□□□□ -0.5
LINC01116-202ENST00000339037 APOA2P02652 100 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 IFNA6P05013 189 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 SCTP09683 121 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
LINC01116-202ENST00000339037 HAGHQ16775 308 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 PLAC9Q5JTB6 97 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 IZUMO2Q6UXV1 221 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 GTSCR1Q86UQ5 136 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 PDPNQ86YL7 162 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 ZNF383Q8NA42 475 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 FAM3DQ96BQ1 224 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 Q9N2K0 584 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 C12orf4Q9NQ89 552 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 ZNF221Q9UK13 617 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 MGAT4AQ9UM21 535 aa11.93□□□□□ -0.5
LINC01116-202ENST00000339037 IGKV1-6A0A0C4DH72 117 aa11.92□□□□□ -0.5
LINC01116-202ENST00000339037 EIF4EBP3O60516 100 aaPredicted RBP11.92□□□□□ -0.5
LINC01116-202ENST00000339037 PROP1O75360 226 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms