RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
CSMD2-202ENST00000338325 TRBV6-6A0A0A6YYG2 114 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 A0A0B4J203 849 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 RBMY1BA6NDE4 496 aaKnown RBP8.69□□□□□ -1.02
CSMD2-202ENST00000338325 RBMY1EA6NEQ0 496 aaKnown RBP8.69□□□□□ -1.02
CSMD2-202ENST00000338325 IGLV2-23P01705 113 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 RBMY1DP0C7P1 496 aaKnown RBP8.69□□□□□ -1.02
CSMD2-202ENST00000338325 HTR2CP28335 458 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 PJVKQ0ZLH3 352 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 DEFB125Q8N687 156 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 SNAPC3Q92966 411 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 TM2D1Q9BX74 207 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 RIMS4Q9H426 269 aaPredicted RBP8.69□□□□□ -1.02
CSMD2-202ENST00000338325 SRD5A3Q9H8P0 318 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 SLC35D1Q9NTN3 355 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 PLEKHJ1Q9NW61 149 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 MGAT4AQ9UM21 535 aa8.69□□□□□ -1.02
CSMD2-202ENST00000338325 CD1AP06126 327 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 CRYGBP07316 175 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 CD7P09564 240 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 CELP19835 753 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 UNC119Q13432 240 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 CD300EQ496F6 205 aaPredicted RBP8.68□□□□□ -1.02
CSMD2-202ENST00000338325 KCNG3Q8TAE7 436 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 PHB2Q99623 299 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 HDHD3Q9BSH5 251 aaPredicted RBP8.68□□□□□ -1.02
CSMD2-202ENST00000338325 WFDC10AQ9H1F0 79 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 KCNK15Q9H427 330 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 AK3Q9UIJ7 227 aa8.68□□□□□ -1.02
CSMD2-202ENST00000338325 A0A0A6YYD4 124 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 ZNF785A8K8V0 405 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 M0R1X1 148 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 BMPR1BO00238 502 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 RBMXL2O75526 392 aaKnown RBP8.67□□□□□ -1.02
CSMD2-202ENST00000338325 C1orf100Q5SVJ3 147 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 GLT8D1Q68CQ7 371 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
CSMD2-202ENST00000338325 DYNLRB2Q8TF09 96 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 HARBI1Q96MB7 349 aa8.67□□□□□ -1.02
CSMD2-202ENST00000338325 SMPD3Q9NY59 655 aaPredicted RBP8.67□□□□□ -1.02
CSMD2-202ENST00000338325 EFCAB10A6NFE3 127 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 TMEM14DPA8MWL7 114 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 LY6G6CO95867 125 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 SCTP09683 121 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 APELAP0DMC3 54 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 ST3GAL4Q11206 333 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 EXOSC2Q13868 293 aaKnown RBP8.66□□□□□ -1.02
CSMD2-202ENST00000338325 LRRTM1Q86UE6 522 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 ADAD2Q8NCV1 583 aaKnown RBP8.66□□□□□ -1.02
CSMD2-202ENST00000338325 GGHQ92820 318 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 Q9N2K0 584 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 RDH8Q9NYR8 311 aa8.66□□□□□ -1.02
CSMD2-202ENST00000338325 FAM223BA6NKX1 122 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 MYL12BO14950 172 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 SHOXO15266 292 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 SOCS1O15524 211 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 OR9G9P0C7N8 305 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 SRMP19623 302 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 WNT4P56705 351 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 QRFPP83859 136 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 RHOGP84095 191 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 CBX3Q13185 183 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 INSL4Q14641 139 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 GUCA2BQ16661 112 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 DEFB114Q30KQ6 69 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 TMEM177Q53S58 311 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 RBM48Q5RL73 367 aaKnown RBP8.65□□□□□ -1.02
CSMD2-202ENST00000338325 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 FAM223AQ8IWN6 122 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 C10orf67Q8IYJ2 551 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 PQLC1Q8N2U9 271 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 PHYHIPQ92561 330 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 LPAR5Q9H1C0 372 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 AKIP1Q9NQ31 210 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 C12orf4Q9NQ89 552 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 ZC4H2Q9NQZ6 224 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 FAM53CQ9NYF3 392 aa8.65□□□□□ -1.02
CSMD2-202ENST00000338325 ZNF230Q9UIE0 474 aaPredicted RBP8.65□□□□□ -1.02
CSMD2-202ENST00000338325 HERC2O95714 4834 aa8.65□□□□□ -1.03
CSMD2-202ENST00000338325 IGKV1-6A0A0C4DH72 117 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 MSGN1A6NI15 193 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 TUSC2O75896 110 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 BPNT1O95861 308 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 TAGLNQ01995 201 aaKnown RBP8.64□□□□□ -1.03
CSMD2-202ENST00000338325 MRGPRG-AS1Q2M3A8 158 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 ACSM3Q53FZ2 586 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 URM1Q9BTM9 101 aaKnown RBP8.64□□□□□ -1.03
CSMD2-202ENST00000338325 ST6GALNAC5Q9BVH7 336 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 OR2D2Q9H210 308 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 HSF4Q9ULV5 492 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.64□□□□□ -1.03
CSMD2-202ENST00000338325 SRRM4A7MD48 611 aaKnown RBP8.64□□□□□ -1.03
CSMD2-202ENST00000338325 MPPED1O15442 326 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 KIR2DS2P43631 304 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 ATP5G2Q06055 141 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 TNXAQ16473 311 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 RTL8BQ17RB0 113 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
CSMD2-202ENST00000338325 FAM89BQ8N5H3 189 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms