RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GCM1Q9NP62 436 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 FBXO7Q9Y3I1 522 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 GPR137BO60478 399 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 MMP23AO75900 390 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 OR8G2PQ6IF36 304 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 SPAG16Q8N0X2 631 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 LPAR3Q9UBY5 353 aa10.48□□□□□ -0.73
LIMK1-201ENST00000336180 NUDT19A8MXV4 375 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 SOX15O60248 233 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 S100A7P31151 101 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 MDH2P40926 338 aaKnown RBP10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF134P52741 427 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ETV3LQ6ZN32 361 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
LIMK1-201ENST00000336180 CLN8Q9UBY8 286 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ODAMA1E959 279 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 TUBAL3A6NHL2 446 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 C1QTNF9BB2RNN3 333 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 SRRM5B3KS81 715 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 TMPRSS2O15393 492 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF737O75373 536 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 LY6HO94772 140 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 CD55P08174 381 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 C1QTNF9P0C862 333 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 S100GP29377 79 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 PAX9P55771 341 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 BRWD1-AS2P59051 145 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF383Q8NA42 475 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 KCNJ16Q9NPI9 418 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 ZFYVE26Q68DK2 2539 aa10.47□□□□□ -0.73
LIMK1-201ENST00000336180 PVALBP20472 110 aaPredicted RBP10.46□□□□□ -0.73
LIMK1-201ENST00000336180 COL8A2P25067 703 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 ARL16Q0P5N6 197 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 MIDNQ504T8 468 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 NCR3LG1Q68D85 454 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 FAM185AQ8N0U4 392 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 ZNF295-AS1Q8N0V1 137 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 OR5D13Q8NGL4 314 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 OOEPA6NGQ2 149 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 CLDN14O95500 239 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 CAMLGP49069 296 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 BLOC1S1P78537 153 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 RHOFQ9HBH0 211 aa10.46□□□□□ -0.73
LIMK1-201ENST00000336180 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
LIMK1-201ENST00000336180 TRBV6-6A0A0A6YYG2 114 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 HMGB3O15347 200 aaKnown RBP10.46□□□□□ -0.74
LIMK1-201ENST00000336180 FCGR3BO75015 233 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 CLDN1O95832 211 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 OPN1MWP04001 364 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 OPN1MW2P0DN77 364 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 OPN1MW3P0DN78 364 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 RAB4AP20338 218 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 HNF1AP20823 631 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 ATP6V0CP27449 155 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 ADIPOQQ15848 244 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 HSD17B13Q7Z5P4 300 aaPredicted RBP10.46□□□□□ -0.74
LIMK1-201ENST00000336180 PHYHIPLQ96FC7 376 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 RSG1Q9BU20 258 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 TLNRD1Q9H1K6 362 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 PLEKHF2Q9H8W4 249 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 PLEKHA2Q9HB19 425 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 RPH3ALQ9UNE2 315 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 DYSFO75923 2080 aa10.46□□□□□ -0.74
LIMK1-201ENST00000336180 M0R1X1 148 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 FGF16O43320 207 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 PROP1O75360 226 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 DEFA4P12838 97 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 SELENOVP59797 346 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 RND3P61587 244 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 TMEM108Q6UXF1 575 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 JTBO76095 146 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 CRYBA1P05813 215 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 MYOD1P15172 320 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 P2RY1P47900 373 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 PPT1P50897 306 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 CCL20P78556 96 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 SLC35E4Q6ICL7 350 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 TSNAXQ99598 290 aaKnown RBP10.45□□□□□ -0.74
LIMK1-201ENST00000336180 NKX6-2Q9C056 277 aaPredicted RBP10.45□□□□□ -0.74
LIMK1-201ENST00000336180 HSBP1L1C9JCN9 74 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 MOB1BQ7L9L4 216 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 REC114Q7Z4M0 266 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 CBLN2Q8IUK8 224 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 SPIN2AQ99865 258 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 SPIN2BQ9BPZ2 258 aa10.45□□□□□ -0.74
LIMK1-201ENST00000336180 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 SPINT2O43291 252 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 H2AFB1P0C5Y9 115 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 LMO1P25800 156 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 SRPXP78539 464 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 ID3Q02535 119 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 RNF212Q495C1 297 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 PRAMEF5Q5TYX0 476 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 CDPF1Q6NVV7 123 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 THNSL2Q86YJ6 484 aa10.44□□□□□ -0.74
LIMK1-201ENST00000336180 H1FXQ92522 213 aaKnown RBP10.44□□□□□ -0.74
LIMK1-201ENST00000336180 RND1Q92730 232 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms