RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 BORCS5Q969J3 196 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 AKR1E2Q96JD6 320 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 GPHA2Q96T91 129 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 PRRT1Q99946 306 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 PITPNC1Q9UKF7 332 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
APOBEC3B-202ENST00000335760 H0YJW9 148 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 GPR31O00270 319 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 APOA2P02652 100 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 TMEM11P17152 192 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 MC5RP33032 325 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 CCBE1Q6UXH8 406 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 IDO2Q6ZQW0 420 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 SLC38A6Q8IZM9 456 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR2T10Q8NGZ9 312 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 ADTRPQ96IZ2 230 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 HSD17B10Q99714 261 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 RSRP1Q9BUV0 290 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 LINC00473A8K010 186 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 CENPXA8MT69 81 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 H7C2Y5 167 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 GPR137BO60478 399 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 MOSP00540 346 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 ECI1P42126 302 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 RPL30P62888 115 aaKnown RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 EBI3Q14213 229 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 PHLDA2Q53GA4 152 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 ZNF66Q6ZN08 573 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 KCTD9Q7L273 389 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 CMTM1Q8IZ96 169 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 BVESQ8NE79 360 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 OR13C8Q8NGS7 320 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 MRGPRFQ96AM1 343 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 EAF1Q96JC9 268 aaPredicted RBP11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 SLC35D1Q9NTN3 355 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 WASHC3Q9Y3C0 194 aa11.28□□□□□ -0.6
APOBEC3B-202ENST00000335760 NAP1L6A6NFF2 107 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 UPK1BO75841 260 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 PI3P19957 117 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR2B11Q5JQS5 317 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 C16orf87Q6PH81 154 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 ZFAND1Q8TCF1 268 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 DDB2Q92466 427 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 TSC22D3Q99576 134 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 C7orf50Q9BRJ6 194 aaKnown RBP11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 PRELID3BQ9Y3B1 194 aa11.27□□□□□ -0.61
APOBEC3B-202ENST00000335760 PLA2G10O15496 165 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 CHST1O43916 411 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 PGLYRP1O75594 196 aaPredicted RBP11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR2F2O95006 317 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 RRASP10301 218 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 S100GP29377 79 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 TAGLNQ01995 201 aaKnown RBP11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 CBX3Q13185 183 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 RTL8BQ17RB0 113 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 PDPNQ86YL7 162 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 Q8N6K4 173 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 OR51H1Q8NH63 302 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 RBM14Q96PK6 669 aaKnown RBP11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 SLC25A33Q9BSK2 321 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 RAB18Q9NP72 206 aa11.26□□□□□ -0.61
APOBEC3B-202ENST00000335760 FAM181BA6NEQ2 426 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 LYRM1O43325 122 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 FCGR3BO75015 233 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 IGKV1-16P04430 117 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 RLN1P04808 185 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 CTSDP07339 412 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 CCR6P51684 374 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 CATR1Q13166 79 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 SURF2Q15527 256 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 TBC1D26Q86UD7 250 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 ZNF486Q96H40 463 aaPredicted RBP11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 RITA1Q96K30 269 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 SCGB3A2Q96PL1 93 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 SLC2A9Q9NRM0 540 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 GPR132Q9UNW8 380 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 C14orf166Q9Y224 244 aaKnown RBP11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 MOB4Q9Y3A3 225 aa11.25□□□□□ -0.61
APOBEC3B-202ENST00000335760 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 CRYBA1P05813 215 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 F2RL1P55085 397 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 PIGPP57054 158 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 RND3P61587 244 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 RPS16P62249 146 aaKnown RBP11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 IFITM3Q01628 133 aa11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 DHRS7BQ6IAN0 325 aaPredicted RBP11.24□□□□□ -0.61
APOBEC3B-202ENST00000335760 RTBDNQ9BSG5 229 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms