RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ZNF362Q5T0B9 420 aaPredicted RBP12.76□□□□□ -0.37
C9orf47-201ENST00000334490 UQCC3Q6UW78 93 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 NPVFQ9HCQ7 196 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 TMEM140Q9NV12 185 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 NEUROG3Q9Y4Z2 214 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 ZNF407Q9C0G0 2248 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 A0A1B0GTI1 187 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 CEACAM18A8MTB9 384 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 ASPHD2Q6ICH7 369 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 OR4C13Q8NGP0 309 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.37
C9orf47-201ENST00000334490 IQCF6A8MYZ5 107 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 MFNGO00587 321 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 TIMP3P35625 211 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 ARTNQ5T4W7 220 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 POC1AQ8NBT0 407 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 STXBP6Q8NFX7 210 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 C7orf66A4D0T2 115 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 GGNQ86UU5 652 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 OR4A5Q8NH83 315 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 WBP1Q96G27 269 aa12.76□□□□□ -0.37
C9orf47-201ENST00000334490 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
C9orf47-201ENST00000334490 CREBBPQ92793 2442 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 ABCA1O95477 2261 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 FOXG1P55316 489 aaPredicted RBP12.75□□□□□ -0.37
C9orf47-201ENST00000334490 NHLH2Q02577 135 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 POM121Q96HA1 1249 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 MARCH11A6NNE9 402 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 OR2A4O95047 310 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 P2RY4P51582 365 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 OR2A7Q96R45 310 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 MRPL37Q9BZE1 423 aaKnown RBP12.75□□□□□ -0.37
C9orf47-201ENST00000334490 TGOLN2O43493 480 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 TGFAP01135 160 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 OR10J1P30954 320 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 CXorf66Q5JRM2 361 aaPredicted RBP12.75□□□□□ -0.37
C9orf47-201ENST00000334490 C1QTNF12Q5T7M4 302 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 ZNF385CQ66K41 422 aaPredicted RBP12.75□□□□□ -0.37
C9orf47-201ENST00000334490 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 ZIC4Q8N9L1 334 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 LURAP1Q96LR2 239 aa12.75□□□□□ -0.37
C9orf47-201ENST00000334490 SHISA3A0PJX4 238 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 RBFOX3A6NFN3 312 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 C11orf94C9JXX5 98 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 HYPMO75409 117 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 WNT5AP41221 380 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 TMEM252Q8N6L7 170 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 C2CD4CQ8TF44 421 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 NOTCH2Q04721 2471 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 C12orf77C9JDV5 145 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 CORTO00230 105 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 USF1P22415 310 aaPredicted RBP12.74□□□□□ -0.37
C9orf47-201ENST00000334490 HSPE1P61604 102 aaKnown RBP12.74□□□□□ -0.37
C9orf47-201ENST00000334490 C16orf82Q7Z2V1 217 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 SLC35E3Q7Z769 313 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 IGKV3D-15A0A087WSY6 115 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 OR2J3O76001 311 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 ATP6V0CP27449 155 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 DRAM1Q8N682 238 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 MDS2Q8NDY4 140 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 GPR146Q96CH1 333 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 CADP27708 2225 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 SNRPCP09234 159 aaKnown RBP12.74□□□□□ -0.37
C9orf47-201ENST00000334490 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 DOCK7Q96N67 2140 aa12.74□□□□□ -0.37
C9orf47-201ENST00000334490 HEATR1Q9H583 2144 aaKnown RBP12.74□□□□□ -0.37
C9orf47-201ENST00000334490 FAM157CP0CG43 387 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 MANBALQ9NQG1 85 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 HIGD1AQ9Y241 93 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 S1PR2O95136 353 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 GALR1P47211 349 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 PPOXP50336 477 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 FAM162BQ5T6X4 162 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 MS4A10Q96PG2 267 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 COL25A1Q9BXS0 654 aaPredicted RBP12.73□□□□□ -0.37
C9orf47-201ENST00000334490 CBLN4Q9NTU7 201 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 CLDN34H7C241 214 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 ZNF818PQ6ZRF7 136 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 Q6ZS92 163 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 TFPI2P48307 235 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 VKORC1L1Q8N0U8 176 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
C9orf47-201ENST00000334490 KLHDC3Q9BQ90 382 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 FAM103A1Q9BTL3 118 aaKnown RBP12.73□□□□□ -0.37
C9orf47-201ENST00000334490 C7orf69Q9H7B7 122 aa12.73□□□□□ -0.37
C9orf47-201ENST00000334490 IGHV1-18A0A0C4DH31 117 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 SEC14L6B5MCN3 397 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 KBTBD11O94819 623 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 OR2T10Q8NGZ9 312 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 DCTN5Q9BTE1 182 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 NPDC1Q9NQX5 325 aaPredicted RBP12.72□□□□□ -0.37
C9orf47-201ENST00000334490 NOTCH4Q99466 2003 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 KCNAB3O43448 404 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 PAGE4O60829 102 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 GNLYP22749 145 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 KIR2DL2P43627 348 aaPredicted RBP12.72□□□□□ -0.37
C9orf47-201ENST00000334490 RND2P52198 227 aa12.72□□□□□ -0.37
C9orf47-201ENST00000334490 FGFBP3Q8TAT2 258 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms