RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ARG1P05089 322 aa13.39□□□□□ -0.27
SHOX-201ENST00000334060 DHRS11Q6UWP2 260 aa13.39□□□□□ -0.27
SHOX-201ENST00000334060 LINC00052Q96N35 136 aa13.39□□□□□ -0.27
SHOX-201ENST00000334060 YPEL2Q96QA6 119 aa13.39□□□□□ -0.27
SHOX-201ENST00000334060 ABHD14AQ9BUJ0 271 aa13.39□□□□□ -0.27
SHOX-201ENST00000334060 GPN1Q9HCN4 374 aaPredicted RBP13.39□□□□□ -0.27
SHOX-201ENST00000334060 SAA2-SAA4A0A096LPE2 208 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 H2AFB1P0C5Y9 115 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 SAA2P0DJI9 122 aaPredicted RBP13.38□□□□□ -0.27
SHOX-201ENST00000334060 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
SHOX-201ENST00000334060 GLDNQ6ZMI3 551 aaPredicted RBP13.38□□□□□ -0.27
SHOX-201ENST00000334060 ZNF818PQ6ZRF7 136 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 SLC25A48Q6ZT89 311 aaKnown RBP13.38□□□□□ -0.27
SHOX-201ENST00000334060 LYG1Q8N1E2 194 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 ZNF251Q9BRH9 671 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 CLEC7AQ9BXN2 247 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
SHOX-201ENST00000334060 VSIG4Q9Y279 399 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 OR2W1Q9Y3N9 320 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 CD24P25063 80 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 ZNF626Q68DY1 528 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 HILPDAQ9Y5L2 63 aa13.38□□□□□ -0.27
SHOX-201ENST00000334060 TRAV6A0A075B6T7 132 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 A0A1W2PPH5 198 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 NMBP08949 121 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 CXCL3P19876 107 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 GNRHRP30968 328 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 SAA4P35542 130 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 HLA-DRB5Q30154 266 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 FAM120AOSQ5T036 256 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 C1orf122Q6ZSJ8 110 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 OR2AK2Q8NG84 335 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 SLC25A32Q9H2D1 315 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 BEX1Q9HBH7 125 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 TAS2R8Q9NYW2 309 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 KCNS2Q9ULS6 477 aa13.37□□□□□ -0.27
SHOX-201ENST00000334060 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 H7C2Y5 167 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 FSHBP01225 129 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 RBP4P02753 201 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 IFNA6P05013 189 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 IL5P05113 134 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 CD34P28906 385 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 RAB13P51153 203 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 Q3ZCU0 254 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 PHLDA2Q53GA4 152 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 ADAD2Q8NCV1 583 aaKnown RBP13.36□□□□□ -0.27
SHOX-201ENST00000334060 OR11H6Q8NGC7 330 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 OR9G1Q8NH87 305 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 MOB3AQ96BX8 217 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 TOLLIPQ9H0E2 274 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 IGHV3-72A0A0B4J1Y9 119 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 POM121CA8CG34 1229 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 OR2A4O95047 310 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 CFDP00746 253 aaPredicted RBP13.36□□□□□ -0.27
SHOX-201ENST00000334060 RPL30P62888 115 aaKnown RBP13.36□□□□□ -0.27
SHOX-201ENST00000334060 CLEC9AQ6UXN8 241 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 OR2A7Q96R45 310 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 ZNF107Q9UII5 783 aaPredicted RBP13.36□□□□□ -0.27
SHOX-201ENST00000334060 HIVEP2P31629 2446 aa13.36□□□□□ -0.27
SHOX-201ENST00000334060 IGHV1-69DA0A0B4J2H0 117 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 BUB1B-PAK6H3BSN5 160 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 IGHV1-69P01742 117 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 S100A11P31949 105 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 MECP2P51608 486 aaKnown RBP13.35□□□□□ -0.27
SHOX-201ENST00000334060 FGL1Q08830 312 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 DRAM1Q8N682 238 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 LINC00469Q8N7U9 141 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 OR10A7Q8NGE5 316 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 TERB2Q8NHR7 220 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 ST6GALNAC6Q969X2 333 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 SLC5A7Q9GZV3 580 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 C5orf66Q9H5L9 145 aa13.35□□□□□ -0.27
SHOX-201ENST00000334060 RBM7Q9Y580 266 aaKnown RBP13.35□□□□□ -0.27
SHOX-201ENST00000334060 LINC00473A8K010 186 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 LY6LH3BQJ8 138 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 NPFFO15130 113 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 UBE2E1P51965 193 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 SSX2Q16385 188 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 ACTBL2Q562R1 376 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 OR2B11Q5JQS5 317 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 UQCC3Q6UW78 93 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 ARRDC1Q8N5I2 433 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 OR13D1Q8NGV5 346 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 OR10X1Q8NGY0 326 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 TMEM230Q96A57 120 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 RTBDNQ9BSG5 229 aaPredicted RBP13.34□□□□□ -0.27
SHOX-201ENST00000334060 MRPL20Q9BYC9 149 aaKnown RBP13.34□□□□□ -0.27
SHOX-201ENST00000334060 NAV3Q8IVL0 2385 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 TEX46H3BTG2 121 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 IFNA4P05014 189 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 CTXN2P0C2S0 81 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 TBPP20226 339 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 BRWD1-AS2P59051 145 aa13.34□□□□□ -0.27
SHOX-201ENST00000334060 MEF2DQ14814 521 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms