RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 A0A0G2JMM0 328 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 A0A1W2PPB8 328 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 A0A1W2PRS3 328 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 LNP1A1A4G5 178 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 KIR3DP1A8MWS1 328 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 PDCD6O75340 191 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 CCL3P10147 92 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 NTF3P20783 257 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 CDKN1BP46527 198 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
CCDC87-201ENST00000333861 GNB1P62873 340 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 VAMP3Q15836 100 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.4□□□□□ -0.9
CCDC87-201ENST00000333861 ST8SIA1Q92185 356 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 TAF15Q92804 592 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC87-201ENST00000333861 RCHY1Q96PM5 261 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 WIPI2Q9Y4P8 454 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 KALRNO60229 2985 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 SYNGR2O43760 224 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 IFI6P09912 130 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 ATP6V1FQ16864 119 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 LRRC75BQ2VPJ9 315 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 KRTCAP3Q53RY4 240 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 MRPL18Q9H0U6 180 aaKnown RBP9.4□□□□□ -0.9
CCDC87-201ENST00000333861 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 ELOVL5Q9NYP7 299 aa9.4□□□□□ -0.9
CCDC87-201ENST00000333861 TBL2Q9Y4P3 447 aaKnown RBP9.4□□□□□ -0.9
CCDC87-201ENST00000333861 TRBV20OR9-2A0A075B6H5 130 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 A0A0J9YW62 118 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 AMTP48728 403 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 LHX2P50458 406 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 ZNF90Q03938 601 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 UBE2V1Q13404 147 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 HLA-DRB5Q30154 266 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 Q8NFD4 153 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 PP6455Q8WZ26 134 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 AGMATQ9BSE5 352 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 LRP4O75096 1905 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 A0A1W2PR77 199 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 CD300LBA8K4G0 201 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 FCN1O00602 326 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 NGFP01138 241 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 TMEM11P17152 192 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
CCDC87-201ENST00000333861 KLF3P57682 345 aaPredicted RBP9.39□□□□□ -0.91
CCDC87-201ENST00000333861 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 SIGLECL1Q8N7X8 197 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 OR56B2PQ8NGI1 322 aa9.39□□□□□ -0.91
CCDC87-201ENST00000333861 RP1L1Q8IWN7 2480 aaPredicted RBP9.39□□□□□ -0.91
CCDC87-201ENST00000333861 A0A1B0GX78 115 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 ODAMA1E959 279 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 ITGB1BP1O14713 200 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 RAMP3O60896 148 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 CLDN14O95500 239 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 IGKV1-5P01602 117 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 UCP1P25874 307 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 G6PCP35575 357 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 SRP14P37108 136 aaKnown RBP9.38□□□□□ -0.91
CCDC87-201ENST00000333861 TCL1AP56279 114 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 RIPPLY3P57055 190 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 CENPVQ7Z7K6 275 aaPredicted RBP9.38□□□□□ -0.91
CCDC87-201ENST00000333861 TPRX1Q8N7U7 411 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 Q8N976 141 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 OR1L1Q8NH94 360 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 LOC102725191A0A1B0GVB3 256 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 AQP7P3A6NL99 342 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 RHBDL1O75783 438 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 TYMSP04818 313 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 EDDM3BP56851 147 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 RELBQ01201 579 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 CEACAM16Q2WEN9 425 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 FBLN7Q53RD9 439 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 WDR5BQ86VZ2 330 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 WFDC8Q8IUA0 241 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 SPTSSAQ969W0 71 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 NEIL1Q96FI4 390 aaPredicted RBP9.38□□□□□ -0.91
CCDC87-201ENST00000333861 UHRF2Q96PU4 802 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 LRFN3Q9BTN0 628 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 PCED1AQ9H1Q7 454 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 DEPPQ9NTK1 212 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 EP300Q09472 2414 aaPredicted RBP9.38□□□□□ -0.91
CCDC87-201ENST00000333861 SNURFLB1AK76 121 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 C10orf142B7Z368 130 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 IGLC2P0DOY2 106 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 IGLC3P0DOY3 106 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 KITLGP21583 273 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 SRPXP78539 464 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
CCDC87-201ENST00000333861 ZIC4Q8N9L1 334 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 DEFB126Q9BYW3 111 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 MTCH1Q9NZJ7 389 aa9.38□□□□□ -0.91
CCDC87-201ENST00000333861 IGHV1OR21-1A0A087WYE8 117 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 CLEC18AA5D8T8 446 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 DEFB108AA8MXU0 73 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 TLX3O43711 291 aaPredicted RBP9.37□□□□□ -0.91
CCDC87-201ENST00000333861 GOSR1O95249 250 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 CFIP05156 583 aa9.37□□□□□ -0.91
CCDC87-201ENST00000333861 PSG1P11464 419 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms