RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 C11orf1Q9H5F2 150 aa11.15□□□□□ -0.62
TUBB2A-201ENST00000333628 ZNF581Q9P0T4 197 aa11.15□□□□□ -0.62
TUBB2A-201ENST00000333628 UBE2J1Q9Y385 318 aaPredicted RBP11.15□□□□□ -0.62
TUBB2A-201ENST00000333628 NIPBLQ6KC79 2804 aaeCLIP11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 BTBD17A6NE02 478 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 H0Y980 276 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 J3QT63 122 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 HSPA12AO43301 675 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 SYNGR1O43759 233 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 PITX3O75364 302 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 FSTL3O95633 263 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 FOLR2P14207 255 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 EGR1P18146 543 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 LMO1P25800 156 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 IL2RGP31785 369 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 CD80P33681 288 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 MDH2P40926 338 aaKnown RBP11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 ARHGDIBP52566 201 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 LMO4P61968 165 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 TMEM249Q2WGJ8 235 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 MOB1BQ7L9L4 216 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 Q8IYB0 196 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 TP53RKQ96S44 253 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 SMCO4Q9NRQ5 59 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 CACFD1Q9UGQ2 172 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 MLXQ9UH92 298 aa11.14□□□□□ -0.63
TUBB2A-201ENST00000333628 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 TMEM155Q4W5P6 130 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 Q6ZPA2 131 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 TBC1D26Q86UD7 250 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 C15orf54Q8N8G6 183 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 OR52M1Q8NGK5 317 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 DYRK2Q92630 601 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 SLAMF9Q96A28 289 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 MTCH1Q9NZJ7 389 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 RCL1Q9Y2P8 373 aaKnown RBP11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.631e-6■□□□□ 10.9
TUBB2A-201ENST00000333628 DNHD1Q96M86 4753 aa11.13□□□□□ -0.63
TUBB2A-201ENST00000333628 OOEPA6NGQ2 149 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 SRRM5B3KS81 715 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 DEGS1O15121 323 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 CAMLGP49069 296 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 EWSR1Q01844 656 aaKnown RBP eCLIP11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 ID3Q02535 119 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 IGSF11Q5DX21 431 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 BRICD5Q6PL45 260 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 GNPNAT1Q96EK6 184 aaPredicted RBP11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 ZNF488Q96MN9 340 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 CABLES2Q9BTV7 478 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 C19orf12Q9NSK7 152 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 PLA2G2EQ9NZK7 142 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 POLDIP2Q9Y2S7 368 aa11.12□□□□□ -0.63
TUBB2A-201ENST00000333628 IGHV3OR15-7A0A075B7D8 119 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 TRAV38-1A0A0B4J264 116 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 SIGLEC5O15389 551 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 ACAA1P09110 424 aaPredicted RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 NPBWR1P48145 328 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 VAMP2P63027 116 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 GUK1Q16774 197 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 RNF212Q495C1 297 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 TEX36Q5VZQ5 186 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 FAM90A1Q86YD7 464 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 SMIM3Q9BZL3 60 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 ZNF665Q9H7R5 613 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 UNKLQ9H9P5 680 aaKnown RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 WFDC1Q9HC57 220 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 FAM96BQ9Y3D0 163 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 A0A1B0GU03 582 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 CD5LO43866 347 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 IGHV2-5P01817 119 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 OR8U9P0C7N5 309 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 PGA5P0DJD9 388 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 IGHV4-31P0DP07 118 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 ERVK11-1P61568 191 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 MIDNQ504T8 468 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 SPIN3Q5JUX0 258 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 LYPD2Q6UXB3 125 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 ZNF818PQ6ZRF7 136 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 FAM58AQ8N1B3 248 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 BATF2Q8N1L9 274 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 OR8U1Q8NH10 309 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 MRPL30Q8TCC3 161 aaKnown RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 NEK7Q8TDX7 302 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 SECTM1Q8WVN6 248 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 AKR1E2Q96JD6 320 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 TMEM231Q9H6L2 316 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 PATZ1Q9HBE1 687 aaKnown RBP11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
TUBB2A-201ENST00000333628 K7N7A8 449 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms