RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 PSG7Q13046 419 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 SLC16A13Q7RTY0 426 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 RHOVQ96L33 236 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 Q0VFX4 171 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 DCTN5Q9BTE1 182 aa11.07□□□□□ -0.64
VSTM4-202ENST00000332853 MARCH11A6NNE9 402 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 PLAUP00749 431 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 REG1AP05451 166 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 PTGDSP41222 190 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 FOXG1P55316 489 aaPredicted RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 PNRC1Q12796 327 aaPredicted RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 NHLRC3Q5JS37 347 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 OR2T10Q8NGZ9 312 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 WDR61Q9GZS3 305 aaKnown RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 GAPDHP04406 335 aaKnown RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 MMP9P14780 707 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 OR4C12Q96R67 309 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 REPIN1Q9BWE0 567 aaKnown RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 SUMO1P63165 101 aaKnown RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 ACP7Q6ZNF0 438 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 ZNF788Q6ZQV5 615 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 FAM222BQ8WU58 562 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 A0A0A6YYD4 124 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 ZNF716A6NP11 495 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 TNFRSF9Q07011 255 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 FANCMQ8IYD8 2048 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 M0QZ24 198 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 MIC13Q5XKP0 118 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 EAF1Q96JC9 268 aaPredicted RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 NPVFQ9HCQ7 196 aa11.06□□□□□ -0.64
VSTM4-202ENST00000332853 METTL1Q9UBP6 276 aaKnown RBP11.06□□□□□ -0.64
VSTM4-202ENST00000332853 DOCK9Q9BZ29 2069 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 HELTA6NFD8 242 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 SEC14L6B5MCN3 397 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 OR10J1P30954 320 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 LAMTOR1Q6IAA8 161 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 SIRT7Q9NRC8 400 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 DNAJC13O75165 2243 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 IGHV3-48P01763 117 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 SPCS3P61009 180 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 RANP62826 216 aaKnown RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 ABHD12Q8N2K0 398 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 PLXND1Q9Y4D7 1925 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 IGHV2OR16-5A0A0B4J2B6 119 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 TOMM20LQ6UXN7 152 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 C16orf82Q7Z2V1 217 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 ZIC4Q8N9L1 334 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 RNF2Q99496 336 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 CEACAM18A8MTB9 384 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 CEACAM1P13688 526 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 HOXA6P31267 233 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 KHDC3LQ587J8 217 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 PAQR4Q8N4S7 273 aaPredicted RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 TAF15Q92804 592 aaKnown RBP eCLIP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 IL22RA2Q969J5 263 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 LOC102723971A0A1B0GUV8 181 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 SLC25A17O43808 307 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 BCL2P10415 239 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 H1FOOQ8IZA3 346 aaPredicted RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 PUSL1Q8N0Z8 303 aaKnown RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 MEGF10Q96KG7 1140 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
VSTM4-202ENST00000332853 MRPS18CQ9Y3D5 142 aaKnown RBP11.05□□□□□ -0.64
VSTM4-202ENST00000332853 PDE6DO43924 150 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 ERVFRD-1P60508 538 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 OR1L6Q8NGR2 347 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 TMEM171Q8WVE6 324 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 ANAPC16Q96DE5 110 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 RNF115Q9Y4L5 304 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 FAM74A7A6NL05 159 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 ARF6P62330 175 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 FAM209AQ5JX71 171 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 TIMM23BQ5SRD1 257 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 GGNQ86UU5 652 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 LDLRAD3Q86YD5 345 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 PERPQ96FX8 193 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 C5orf63A6NC05 138 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 C12orf77C9JDV5 145 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 CD8AP01732 235 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 UCP3P55916 312 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 FA2HQ7L5A8 372 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 WBP1Q96G27 269 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 PLXNA2O75051 1894 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 USF1P22415 310 aaPredicted RBP11.04□□□□□ -0.64
VSTM4-202ENST00000332853 SRP14P37108 136 aaKnown RBP11.04□□□□□ -0.64
VSTM4-202ENST00000332853 DPPA3Q6W0C5 159 aa11.04□□□□□ -0.64
VSTM4-202ENST00000332853 PQLC2LA1A4F0 135 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 AP4M1O00189 453 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 SRD5A3Q9H8P0 318 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 WASHC3Q9Y3C0 194 aa11.03□□□□□ -0.64
VSTM4-202ENST00000332853 GOLGB1Q14789 3259 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms