RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 PLGLAQ15195 96 aa11.07□□□□□ -0.64
LIMS1-201ENST00000332345 NDUFA11Q86Y39 141 aa11.07□□□□□ -0.64
LIMS1-201ENST00000332345 STPG2Q8N412 459 aa11.07□□□□□ -0.64
LIMS1-201ENST00000332345 NOL4LQ96MY1 436 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-201ENST00000332345 CITED2Q99967 270 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-201ENST00000332345 MMP27Q9H306 513 aa11.07□□□□□ -0.64
LIMS1-201ENST00000332345 SCPEP1Q9HB40 452 aa11.07□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF107Q9UII5 783 aaPredicted RBP11.07□□□□□ -0.64
LIMS1-201ENST00000332345 SULT1C2O00338 296 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 RRHO14718 337 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 TPPPO94811 219 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 HLA-DRB1P01911 266 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 IGKV1-16P04430 117 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 FCER2P06734 321 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 DUTP33316 252 aaKnown RBP11.06□□□□□ -0.64
LIMS1-201ENST00000332345 LGALS7P47929 136 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 LINC00205P59089 165 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 RTL8BQ17RB0 113 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 NSUN5P1Q3KNT7 163 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF329Q86UD4 541 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 SNX29P2Q8IUI4 249 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 COMMD1Q8N668 190 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 C15orf40Q8WUR7 153 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 GIMAP1Q8WWP7 306 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 SNAPC3Q92966 411 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 LINC00527Q9UJ94 153 aa11.06□□□□□ -0.64
LIMS1-201ENST00000332345 TSSC4Q9Y5U2 329 aaPredicted RBP11.06□□□□□ -0.64
LIMS1-201ENST00000332345 RGS5O15539 181 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 IGF1P05019 195 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 NAT1P18440 290 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 TAS2R46P59540 309 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 TEX38Q6PEX7 206 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 BVESQ8NE79 360 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 FAM110DQ8TAY7 271 aaPredicted RBP11.05□□□□□ -0.64
LIMS1-201ENST00000332345 DYNC2LI1Q8TCX1 351 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 GPX8Q8TED1 209 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 FBXL15Q9H469 300 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 ADAM30Q9UKF2 790 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 ANAPC10Q9UM13 185 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 PRELID3BQ9Y3B1 194 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 PKD1L1Q8TDX9 2849 aa11.05□□□□□ -0.64
LIMS1-201ENST00000332345 IGKV1D-13A0A0B4J2D9 117 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 SHOXO15266 292 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 PLXNB1O43157 2135 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 SPDEFO95238 335 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 PPYP01298 95 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 IGKV1-13P0DP09 117 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 VDAC1P21796 283 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 AADACP22760 399 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 PSG5Q15238 335 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 MSMO1Q15800 293 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF660Q6AZW8 331 aaPredicted RBP11.04□□□□□ -0.64
LIMS1-201ENST00000332345 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 DHRS11Q6UWP2 260 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 ZBTB34Q8NCN2 500 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 OR4F17Q8NGA8 305 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 OR5H2Q8NGV7 314 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 SECTM1Q8WVN6 248 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 OR4F4Q96R69 305 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 HSD17B10Q99714 261 aaKnown RBP11.04□□□□□ -0.64
LIMS1-201ENST00000332345 OR51J1Q9H342 316 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 ZFP57Q9NU63 452 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 EHFQ9NZC4 300 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 CCDC59Q9P031 241 aaKnown RBP11.04□□□□□ -0.64
LIMS1-201ENST00000332345 METTL1Q9UBP6 276 aaKnown RBP11.04□□□□□ -0.64
LIMS1-201ENST00000332345 EXTL2Q9UBQ6 330 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF580Q9UK33 172 aa11.04□□□□□ -0.64
LIMS1-201ENST00000332345 RBMX2Q9Y388 322 aaKnown RBP11.04□□□□□ -0.64
LIMS1-201ENST00000332345 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 CCDC160A6NGH7 325 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 H3BMQ9 156 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 TSPAN15O95858 294 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 PMP2P02689 132 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 RFX2P48378 723 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 DYRK1AQ13627 763 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 TMEM177Q53S58 311 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 C10orf99Q6UWK7 81 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF562Q6V9R5 426 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 ZNF66Q6ZN08 573 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 LYSMD2Q8IV50 215 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 OR6F1Q8NGZ6 308 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 DDB2Q92466 427 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 BORCS5Q969J3 196 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 R3HDM4Q96D70 268 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 C5orf30Q96GV9 206 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 HARBI1Q96MB7 349 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 DCUN1D5Q9BTE7 237 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 SLC5A7Q9GZV3 580 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 CEPT1Q9Y6K0 416 aa11.03□□□□□ -0.64
LIMS1-201ENST00000332345 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.64
LIMS1-201ENST00000332345 FBN3Q75N90 2809 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 A0A1W2PRX2 142 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 LINC00473A8K010 186 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 CTDSP2O14595 271 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 IGLV2-14P01704 120 aa11.02□□□□□ -0.65
LIMS1-201ENST00000332345 HLA-DMAP28067 261 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms