RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 PATZ1Q9HBE1 687 aaKnown RBP15.28■□□□□ 0.04
CLSTN3-202ENST00000331148 MTCH1Q9NZJ7 389 aa15.28■□□□□ 0.04
CLSTN3-202ENST00000331148 OR1A1Q9P1Q5 309 aa15.28■□□□□ 0.04
CLSTN3-202ENST00000331148 PPP1R3CQ9UQK1 317 aa15.28■□□□□ 0.04
CLSTN3-202ENST00000331148 A0A0J9YW62 118 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 A0A1W2PNU3 283 aaPredicted RBP15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 CRYAAP02489 173 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 ESDP10768 282 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 ZNF16P17020 682 aaPredicted RBP15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 NTF4P34130 210 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 RAB7AP51149 207 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 FBXW9Q5XUX1 488 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 C11orf42Q8N5U0 333 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 CPT1CQ8TCG5 803 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 VN1R17PQ8TDU5 208 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 CT55Q8WUE5 264 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 DNAJC4Q9NNZ3 241 aa15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 RYDENQ9NUL5 291 aaKnown RBP15.27■□□□□ 0.04
CLSTN3-202ENST00000331148 TRBV6-6A0A0A6YYG2 114 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 TFF3Q07654 80 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 ZNF114Q8NC26 417 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 OR56B2PQ8NGI1 322 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 DERL1Q9BUN8 251 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 CRIM1Q9NZV1 1036 aa15.27■□□□□ 0.03
CLSTN3-202ENST00000331148 FAM90A26D6RGX4 464 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 PDE6DO43924 150 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 SERF1AO75920 110 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 CELA2AP08217 269 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 DEFA4P12838 97 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 GNG10P50151 68 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 HES3Q5TGS1 186 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 IL1F10Q8WWZ1 152 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 SFRP2Q96HF1 295 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 LIN7CQ9NUP9 197 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 TRAPPC2LH3BP13 241 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 COMPP49747 757 aaPredicted RBP15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 LHX2P50458 406 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 MLF1P58340 268 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 TCF15Q12870 199 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 ATP6V1FQ16864 119 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 PIP4P1Q86T03 277 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 FOXB1Q99853 325 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 C1QTNF5Q9BXJ0 243 aa15.26■□□□□ 0.03
CLSTN3-202ENST00000331148 PGPEP1LA6NFU8 196 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 DEGS1O15121 323 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 RBFOX2O43251 390 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 ZIC3O60481 467 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 LIFP15018 202 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 CHRNB4P30926 498 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 ATP5G3P48201 142 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 SSPNQ14714 243 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 MSMO1Q15800 293 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 OR5P3Q8WZ94 311 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 SF3B5Q9BWJ5 86 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 NPCDR1Q9BY65 106 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 FOXJ2Q9P0K8 574 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 CFAP54Q96N23 3096 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 PCNX2A6NKB5 2137 aa15.25■□□□□ 0.03
CLSTN3-202ENST00000331148 NDUFB4O95168 129 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 BMP5P22003 454 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 OR5AU1Q8NGC0 362 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 PSMF1Q92530 271 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 RDH5Q92781 318 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 KCNS2Q9ULS6 477 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 MDFIC2A0A1B0GVS7 189 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 CBLN1P23435 193 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 OTX2P32243 289 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 PCBD1P61457 104 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 CEACAM16Q2WEN9 425 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 PPP1R32Q7Z5V6 425 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 MKXQ8IYA7 352 aa15.24■□□□□ 0.03
CLSTN3-202ENST00000331148 NPIPB11E5RHQ5 1161 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 F6UZH7 168 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 SYNGR1O43759 233 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 CBR3O75828 277 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 KRASP01116 189 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 CRISP2P16562 243 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 CDC34P49427 236 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 DSCR4P56555 118 aaPredicted RBP15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 UBE2G2P60604 165 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 SLC35E1Q96K37 410 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 SGCZQ96LD1 299 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 PRDM14Q9GZV8 571 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 MSL2Q9HCI7 577 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 HSPB7Q9UBY9 170 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 TRAV24A0A0B4J272 114 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 G3V3Y1 287 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 FGFRL1Q8N441 504 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 ZNF709Q8N972 641 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 PRSS33Q8NF86 280 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 OR1L1Q8NH94 360 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 KCNIP2Q9NS61 270 aa15.23■□□□□ 0.03
CLSTN3-202ENST00000331148 PMS2P5A8MQ11 134 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 SERPINA7P05543 415 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 CEACAM21Q3KPI0 293 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 AAED1Q7RTV5 226 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 RPS19BP1Q86WX3 136 aaKnown RBP15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 OR4B1Q8NGF8 309 aa15.22■□□□□ 0.03
CLSTN3-202ENST00000331148 CLN8Q9UBY8 286 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms