RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 PLA2G5P39877 138 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 PSMB3P49720 205 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ATMQ13315 3056 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ADIRFQ15847 76 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 CYP2G1PQ6ZSU1 146 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ZNF826PQ6ZT77 177 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 TMPRSS7Q7RTY8 843 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 OR10P1Q8NGE3 313 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 KLF14Q8TD94 323 aaPredicted RBP12.87□□□□□ -0.35
BRCC3-201ENST00000330045 SLC25A22Q9H936 323 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ZMAT5Q9UDW3 170 aaKnown RBP12.87□□□□□ -0.35
BRCC3-201ENST00000330045 CTXND1A0A1B0GTU2 59 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 C17orf98A8MV24 154 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 MBP02144 154 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 FGF7P21781 194 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ARG2P78540 354 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 ZNF383Q8NA42 475 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 OR10G9Q8NGN4 311 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 OR10G7Q8NGN6 311 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 DTD1Q8TEA8 209 aa12.87□□□□□ -0.35
BRCC3-201ENST00000330045 DIDO1Q9BTC0 2240 aaKnown RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 PMS2P5A8MQ11 134 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 C1QTNF9BB2RNN3 333 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 PHOX2AO14813 284 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 ZG16O60844 167 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 KBTBD11O94819 623 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 BRWD1-AS2P59051 145 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 OR5H1A6NKK0 313 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 ZNF729A6NN14 1252 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 MLNRO43193 412 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 GABRA2P47869 451 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 HOXA4Q00056 320 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 INO80CQ6PI98 192 aaPredicted RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 BTNL3Q6UXE8 466 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 GCNT2Q8N0V5 402 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 MRGPRDQ8TDS7 321 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 ZDHHC16Q969W1 377 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 RPUSD4Q96CM3 377 aaKnown RBP12.86□□□□□ -0.35
BRCC3-201ENST00000330045 COQ2Q96H96 371 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 ZDHHC11Q9H8X9 412 aa12.86□□□□□ -0.35
BRCC3-201ENST00000330045 DSPP15924 2871 aaKnown RBP12.85□□□□□ -0.35
BRCC3-201ENST00000330045 RAB29O14966 203 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 CLDN14O95500 239 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 NUBP1P53384 320 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 TLE1Q04724 770 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 BSXQ3C1V8 233 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 FFAR4Q5NUL3 377 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 H2BFWTQ7Z2G1 175 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 OR10A7Q8NGE5 316 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
BRCC3-201ENST00000330045 MRPL37Q9BZE1 423 aaKnown RBP12.85□□□□□ -0.35
BRCC3-201ENST00000330045 GTF3C1Q12789 2109 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 FABP4P15090 132 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 ACP7Q6ZNF0 438 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 Q6ZR03 302 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 C16orf82Q7Z2V1 217 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 TMEM178AQ8NBL3 297 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 PFDN5Q99471 154 aa12.85□□□□□ -0.35
BRCC3-201ENST00000330045 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
BRCC3-201ENST00000330045 TM4SF5O14894 197 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 RBMXL2O75526 392 aaKnown RBP12.84□□□□□ -0.35
BRCC3-201ENST00000330045 TFF1P04155 84 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 PFN1P07737 140 aaKnown RBP12.84□□□□□ -0.35
BRCC3-201ENST00000330045 COX5AP20674 150 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 MDKP21741 143 aaPredicted RBP12.84□□□□□ -0.35
BRCC3-201ENST00000330045 RPS16P62249 146 aaKnown RBP12.84□□□□□ -0.35
BRCC3-201ENST00000330045 RPL23P62829 140 aaKnown RBP12.84□□□□□ -0.35
BRCC3-201ENST00000330045 TFF3Q07654 80 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 TCTEX1D1Q8N7M0 179 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 PARLQ9H300 379 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 SRD5A3Q9H8P0 318 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 MANBALQ9NQG1 85 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 WISP2O76076 250 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 NBL1P41271 181 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 C9orf152Q5JTZ5 239 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 ZNF709Q8N972 641 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 OR4F5Q8NH21 305 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 PRR7Q8TB68 274 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 GATAD1Q8WUU5 269 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 SNX22Q96L94 193 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 OR4F4Q96R69 305 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 TAAR6Q96RI8 345 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 CXXC4Q9H2H0 198 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 LAMP3Q9UQV4 416 aa12.84□□□□□ -0.35
BRCC3-201ENST00000330045 HIST1H1BP16401 226 aaKnown RBP12.83□□□□□ -0.36
BRCC3-201ENST00000330045 PMP22Q01453 160 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 Q6ZT83 130 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 TPRX1Q8N7U7 411 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 NECAP1Q8NC96 275 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 OR4X1Q8NH49 305 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 RAB24Q969Q5 203 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 PYGO2Q9BRQ0 406 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
BRCC3-201ENST00000330045 BSNQ9UPA5 3926 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms