RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ACSM6Q6P461 480 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 MRPL41Q8IXM3 137 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 RAB24Q969Q5 203 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 MALSU1Q96EH3 234 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 ZPBPQ9BS86 351 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 PKIBQ9C010 78 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 ZMAT5Q9UDW3 170 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 A0A1B0GW64 132 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 OPN1MWP04001 364 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 OPN1MW2P0DN77 364 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 OPN1MW3P0DN78 364 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 Q6P435 159 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 LINC00596Q86U02 117 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 Q8IYB0 196 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 CA5BP1Q8WTZ4 195 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 LSM10Q969L4 123 aaKnown RBP10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 PARLQ9H300 379 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 SDF2L1Q9HCN8 221 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 NAT8Q9UHE5 227 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 FUT9Q9Y231 359 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 ACACAQ13085 2346 aa10.86□□□□□ -0.67
HMGCS1-201ENST00000325110 XKRY2A2RUG3 117 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 SMPD2O60906 423 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 IGKV1D-33P01593 117 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 IGKV1-33P01594 117 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 GCSAMLQ5JQS6 135 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 Q6ZS49 121 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 OR51G1Q8NGK1 321 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 ABHD5Q8WTS1 349 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 BCL2L2Q92843 193 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 TMEM147Q9BVK8 224 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 A0A087WWC5 75 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 GPR12P47775 334 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 HES3Q5TGS1 186 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF497Q6ZNH5 498 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 ZNF295-AS1Q8N0V1 137 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 DEFB108BQ8NET1 73 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 KLF14Q8TD94 323 aaPredicted RBP10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 B4DEV8 164 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 M0R1X1 148 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 PPIHO43447 177 aaKnown RBP10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 RNFT1Q5M7Z0 435 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 DPPA3Q6W0C5 159 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 LRP11Q86VZ4 500 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 DEFB123Q8N688 67 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 OR2Z1Q8NG97 314 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 OR4A16Q8NH70 328 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 TREM2Q9NZC2 230 aa10.85□□□□□ -0.67
HMGCS1-201ENST00000325110 IGHV3OR15-7A0A075B7D8 119 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 IFITM10A6NMD0 228 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 C11orf94C9JXX5 98 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 SPINT2O43291 252 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 PTBP3O95758 552 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 CEACAM1P13688 526 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 ACP1P24666 158 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 Q8NFD4 153 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 SSMEM1Q8WWF3 244 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 LEAP2Q969E1 77 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 GPR87Q9BY21 358 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 SPRR3Q9UBC9 169 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 C1QTNF9BB2RNN3 333 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 CDC34P49427 236 aaPredicted RBP10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 COL10A1Q03692 680 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 TMEM178AQ8NBL3 297 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 MRPS18CQ9Y3D5 142 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 INTS1Q8N201 2190 aaKnown RBP10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 C1QL4Q86Z23 238 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 HIST3H2BBQ8N257 126 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 LRRC29Q8WV35 223 aa10.84□□□□□ -0.67
HMGCS1-201ENST00000325110 CTXND1A0A1B0GTU2 59 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF320A2RRD8 509 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 ERVK-16P61578 105 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 ZNF645Q8N7E2 425 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 DMRT1Q9Y5R6 373 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 IGHV2-70P01814 119 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 GYPAP02724 150 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 OR13A1Q8NGR1 328 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 R3HDM4Q96D70 268 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 C17orf112F2Z3M2 114 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 IGHV1-2P23083 117 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 PMS2P11Q13670 270 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 OR4X1Q8NH49 305 aa10.83□□□□□ -0.68
HMGCS1-201ENST00000325110 A0A087X0M5 115 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 A0A1B0GX30 115 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 CD81P60033 236 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 NEIL1Q96FI4 390 aaPredicted RBP10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 KIAA1549Q9HCM3 1950 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 OOEPA6NGQ2 149 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 MARCH11A6NNE9 402 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 RPL23P62829 140 aaKnown RBP10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 P2RY6Q15077 328 aa10.82□□□□□ -0.68
HMGCS1-201ENST00000325110 VWA1Q6PCB0 445 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms