RNA–Protein interactions for RNA: ENST00000321337.11

SENP3-201, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SENP3, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-201ENST00000321337 CACNA1DQ01668 2161 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 ALKBH6Q3KRA9 238 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 TRAV38-1A0A0B4J264 116 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 CDIPTO14735 213 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 SCGB1D1O95968 90 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 RPL15P61313 204 aaKnown RBP21.22■□□□□ 0.99
SENP3-201ENST00000321337 LINC01551Q86U37 167 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 PKIBQ9C010 78 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 MANBALQ9NQG1 85 aa21.22■□□□□ 0.99
SENP3-201ENST00000321337 PIGBOS1A0A0B4J2F0 54 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 A0A0U1RQK1 487 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 ZNF320A2RRD8 509 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 FAM90A26D6RGX4 464 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 TYMSP04818 313 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 GCH1P30793 250 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 CISD2Q8N5K1 135 aaKnown RBP21.21■□□□□ 0.99
SENP3-201ENST00000321337 TMEM204Q9BSN7 226 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 C12orf49Q9H741 205 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 NTN3O00634 580 aaPredicted RBP21.21■□□□□ 0.99
SENP3-201ENST00000321337 SOX15O60248 233 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 COX5AP20674 150 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 OR3A1P47881 315 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 PLP2Q04941 152 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 OR10P1Q8NGE3 313 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 DTD1Q8TEA8 209 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 APH1AQ96BI3 265 aa21.21■□□□□ 0.99
SENP3-201ENST00000321337 POLR3KQ9Y2Y1 108 aaPredicted RBP21.21■□□□□ 0.99
SENP3-201ENST00000321337 PSPNO60542 156 aa21.2■□□□□ 0.98
SENP3-201ENST00000321337 SRP14P37108 136 aaKnown RBP21.2■□□□□ 0.98
SENP3-201ENST00000321337 CYB5R2Q6BCY4 276 aa21.2■□□□□ 0.98
SENP3-201ENST00000321337 MBNL3Q9NUK0 354 aaKnown RBP21.2■□□□□ 0.98
SENP3-201ENST00000321337 MLNRO43193 412 aa21.2■□□□□ 0.98
SENP3-201ENST00000321337 MAGEA5P43359 124 aa21.2■□□□□ 0.98
SENP3-201ENST00000321337 ACOT6Q3I5F7 207 aaPredicted RBP21.2■□□□□ 0.98
SENP3-201ENST00000321337 Q8N7P7 452 aa21.2■□□□□ 0.98
SENP3-201ENST00000321337 NDUFB4O95168 129 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 FKBP11Q9NYL4 201 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 HNF1AP20823 631 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 ARR3P36575 388 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 TIPARPQ7Z3E1 657 aaKnown RBP21.19■□□□□ 0.98
SENP3-201ENST00000321337 ZNF703Q9H7S9 590 aaPredicted RBP21.19■□□□□ 0.98
SENP3-201ENST00000321337 PILRBQ9UKJ0 227 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 TRAPPC1Q9Y5R8 145 aa21.19■□□□□ 0.98
SENP3-201ENST00000321337 RBFOX2O43251 390 aaKnown RBP eCLIP21.18■□□□□ 0.98
SENP3-201ENST00000321337 PDGFBP01127 241 aaPredicted RBP21.18■□□□□ 0.98
SENP3-201ENST00000321337 CELA3BP08861 270 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 CST9LP1Q5W188 147 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 MOB1BQ7L9L4 216 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 MRPS18CQ9Y3D5 142 aaKnown RBP21.18■□□□□ 0.98
SENP3-201ENST00000321337 ERVK11-1P61568 191 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 IQCJQ1A5X6 159 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 ZNF645Q8N7E2 425 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 OR2M7Q8NG81 312 aa21.18■□□□□ 0.98
SENP3-201ENST00000321337 RBMXL2O75526 392 aaKnown RBP21.17■□□□□ 0.98
SENP3-201ENST00000321337 NXPH2O95156 264 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 SYNGR4O95473 234 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 CDC34P49427 236 aaPredicted RBP21.17■□□□□ 0.98
SENP3-201ENST00000321337 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.17■□□□□ 0.98
SENP3-201ENST00000321337 WIPI2Q9Y4P8 454 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 GRIFINA4D1Z8 144 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 C12orf77C9JDV5 145 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 NEURL1O76050 574 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 MBP02144 154 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 EIF4EBP1Q13541 118 aaPredicted RBP21.17■□□□□ 0.98
SENP3-201ENST00000321337 MDP1Q86V88 176 aa21.17■□□□□ 0.98
SENP3-201ENST00000321337 CD82P27701 267 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 ATP6V1FQ16864 119 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 KCNIP4Q6PIL6 250 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 TMEM144Q7Z5S9 345 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 MUC3AQ02505 3323 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 URB1O60287 2271 aaKnown RBP21.16■□□□□ 0.98
SENP3-201ENST00000321337 TRBV20OR9-2A0A075B6H5 130 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 WNT9BO14905 357 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 VENTXO95231 258 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 GRPP07492 148 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 CXorf67Q86X51 503 aaPredicted RBP21.16■□□□□ 0.98
SENP3-201ENST00000321337 ZNF709Q8N972 641 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 CT55Q8WUE5 264 aa21.16■□□□□ 0.98
SENP3-201ENST00000321337 PATZ1Q9HBE1 687 aaKnown RBP21.16■□□□□ 0.98
SENP3-201ENST00000321337 BOKQ9UMX3 212 aaPredicted RBP21.16■□□□□ 0.98
SENP3-201ENST00000321337 CCKARP32238 428 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 EDDM3BP56851 147 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 RAB4BP61018 213 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 MSMO1Q15800 293 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 PXMP4Q9Y6I8 212 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 PPP1CBP62140 327 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 AESQ08117 197 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 TDRG1Q3Y452 100 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 FIP1L1Q6UN15 594 aaKnown RBP21.15■□□□□ 0.98
SENP3-201ENST00000321337 TPRX1Q8N7U7 411 aa21.15■□□□□ 0.98
SENP3-201ENST00000321337 IGHV3-43A0A0B4J1X8 118 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 LINC00473A8K010 186 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 RNF212BA8MTL3 300 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 IGHV3-43DP0DP04 118 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 MCEMP1Q8IX19 187 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 OR2J1Q9GZK6 312 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 GP6Q9HCN6 339 aa21.14■□□□□ 0.98
SENP3-201ENST00000321337 Q6ZR03 302 aa21.14■□□□□ 0.97
SENP3-201ENST00000321337 SGMS2Q8NHU3 365 aa21.14■□□□□ 0.97
SENP3-201ENST00000321337 SERPINA7P05543 415 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms