RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 OR4C46A6NHA9 309 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 TDRG1Q3Y452 100 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 ANKRD39Q53RE8 183 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 OR10G3Q8NGC4 313 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 SHANK1Q9Y566 2161 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 HS3ST3A1Q9Y663 406 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 TMEM56-RWDD3S4R434 201 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 MDC1Q14676 2089 aaKnown RBP14.22□□□□□ -0.13
PACS1-201ENST00000320580 ODAMA1E959 279 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 EPOPA6NHQ4 379 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 ZNF324O75467 553 aaPredicted RBP14.22□□□□□ -0.13
PACS1-201ENST00000320580 LEPROTL1O95214 131 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 RPL31P62899 125 aaKnown RBP14.22□□□□□ -0.13
PACS1-201ENST00000320580 EXT1Q16394 746 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 RBMXL3Q8N7X1 1067 aaKnown RBP14.22□□□□□ -0.13
PACS1-201ENST00000320580 GALMQ96C23 342 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 TAAR6Q96RI8 345 aa14.22□□□□□ -0.13
PACS1-201ENST00000320580 DEFA4P12838 97 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 OR1L3Q8NH93 324 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 SVILO95425 2214 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 TRAV9-2A0A087WT02 112 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 TRBV9A0A0B4J1U6 114 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 SCO2A0A1W2PP80 73 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 DOLPP1Q86YN1 238 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 RPP25LQ8N5L8 163 aaKnown RBP14.21□□□□□ -0.13
PACS1-201ENST00000320580 ABHD3Q8WU67 409 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 RNF166Q96A37 237 aaPredicted RBP14.21□□□□□ -0.13
PACS1-201ENST00000320580 PLA2G2FQ9BZM2 168 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 GNB4Q9HAV0 340 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 IL36RNQ9UBH0 155 aa14.21□□□□□ -0.13
PACS1-201ENST00000320580 HIST1H1EP10412 219 aaKnown RBP14.21□□□□□ -0.14
PACS1-201ENST00000320580 IBA57Q5T440 356 aaKnown RBP14.21□□□□□ -0.14
PACS1-201ENST00000320580 FGFRL1Q8N441 504 aa14.21□□□□□ -0.14
PACS1-201ENST00000320580 RFESDQ8TAC1 157 aa14.21□□□□□ -0.14
PACS1-201ENST00000320580 FOXB1Q99853 325 aa14.21□□□□□ -0.14
PACS1-201ENST00000320580 SH2D2AQ9NP31 389 aa14.21□□□□□ -0.14
PACS1-201ENST00000320580 YTHDF2Q9Y5A9 579 aaKnown RBP14.21□□□□□ -0.14
PACS1-201ENST00000320580 IGHV5-51A0A0C4DH38 117 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 HYPMO75409 117 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 LINC00869P0C866 280 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 GPR12P47775 334 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 ACSF3Q4G176 576 aaPredicted RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 PRSS3P2Q8NHM4 247 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 HSD17B10Q99714 261 aaKnown RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 FNDC4Q9H6D8 234 aaPredicted RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 DIDO1Q9BTC0 2240 aaKnown RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 TNFSF11O14788 317 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 SH2D1BO14796 132 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 FKBP2P26885 142 aaKnown RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 PRRX1P54821 245 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 TMEM196Q5HYL7 178 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 MIC13Q5XKP0 118 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 YRDCQ86U90 279 aaKnown RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 TXNDC17Q9BRA2 123 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 AMY1AP04745 511 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 IFI6P09912 130 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 ZNF137PP52743 207 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 PLGLB1Q02325 96 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 TFF3Q07654 80 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 MPV17L2Q567V2 206 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 TMEM70Q9BUB7 260 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 NCOR1O75376 2440 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 ZNF891A8MT65 544 aaPredicted RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 SPINT2O43291 252 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 NPBWR2P48146 333 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 COA6Q5JTJ3 125 aaKnown RBP14.2□□□□□ -0.14
PACS1-201ENST00000320580 C5orf24Q7Z6I8 188 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 LINC01551Q86U37 167 aa14.2□□□□□ -0.14
PACS1-201ENST00000320580 SERTM2A0A1B0GWG4 89 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 PPIAL4DF5H284 164 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 FABP2P12104 132 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 CCL2P13500 99 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 WDR74Q6RFH5 385 aaPredicted RBP14.19□□□□□ -0.14
PACS1-201ENST00000320580 ELOVL5Q9NYP7 299 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 A0A1W2PN81 502 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 DEFB108AA8MXU0 73 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 ZG16O60844 167 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 FCGR3BO75015 233 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 IGHMP01871 453 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 C3orf79P0CE67 100 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 OR1D5P58170 312 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 SMAGPQ0VAQ4 97 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 SLC25A47Q6Q0C1 308 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 DERL1Q9BUN8 251 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 SSBP3Q9BWW4 388 aaPredicted RBP14.19□□□□□ -0.14
PACS1-201ENST00000320580 MRPS17Q9Y2R5 130 aaKnown RBP14.19□□□□□ -0.14
PACS1-201ENST00000320580 CXCL13O43927 109 aa14.19□□□□□ -0.14
PACS1-201ENST00000320580 IGKV1D-13A0A0B4J2D9 117 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 GAGE12BA1L429 117 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 IGKV1-13P0DP09 117 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 ZNF841Q6ZN19 808 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 ZNF721Q8TF20 911 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 ZNF391Q9UJN7 358 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 FBXL7Q9UJT9 491 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 ATP23Q9Y6H3 246 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 FOXL2P58012 376 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 PRSS8Q16651 343 aa14.18□□□□□ -0.14
PACS1-201ENST00000320580 NHLRC2Q8NBF2 726 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms