RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 OR51I2Q9H344 312 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
CPNE1-201ENST00000317677 IGHV2OR16-5A0A0B4J2B6 119 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 FAM221AA4D161 298 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 OR5B21A6NL26 309 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 IQCF6A8MYZ5 107 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 PDCD6O75340 191 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 RHBDL1O75783 438 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 PFN1P07737 140 aaKnown RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 HOXC12P31275 282 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 RBMXP38159 391 aaKnown RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 FGF12P61328 243 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 GNG3P63215 75 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 KLRB1Q12918 225 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 MRPL49Q13405 166 aaKnown RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 IL13RA2Q14627 380 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 ARL6IP1Q15041 203 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 DPPA3Q6W0C5 159 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 OR5H2Q8NGV7 314 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 CLDND2Q8NHS1 167 aa11□□□□□ -0.65
CPNE1-201ENST00000317677 KLF14Q8TD94 323 aaPredicted RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 SNRNP40Q96DI7 357 aaKnown RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF701Q9NV72 531 aaPredicted RBP11□□□□□ -0.65
CPNE1-201ENST00000317677 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 C20orf202A1L168 122 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 HBE1P02100 147 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 GLRA1P23415 457 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 OPRM1P35372 400 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 MSMPQ1L6U9 139 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 ACOT6Q3I5F7 207 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 TMEM182Q6ZP80 229 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 C22orf34Q6ZV56 151 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 CENPVQ7Z7K6 275 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 LIME1Q9H400 295 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 MLNRO43193 412 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 OR7C1O76099 320 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 MBPP02686 304 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 ELLP55199 621 aaPredicted RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 SMIM15Q7Z3B0 74 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 SFXN3Q9BWM7 321 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 OBP2BQ9NPH6 170 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF835Q9Y2P0 537 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 LSM5Q9Y4Y9 91 aaKnown RBP10.99□□□□□ -0.65
CPNE1-201ENST00000317677 NBASA2RRP1 2371 aa10.99□□□□□ -0.65
CPNE1-201ENST00000317677 RP1L1Q8IWN7 2480 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-201ENST00000317677 A0A0G2JNJ9 132 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 SCGB1D1O95968 90 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 DUSP1P28562 367 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 FAM3BP58499 235 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-201ENST00000317677 IL24Q13007 206 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A2PQ658T7 463 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 MKXQ8IYA7 352 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 C11orf42Q8N5U0 333 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 FAM169BQ8N8A8 192 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 PKIBQ9C010 78 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 HEATR1Q9H583 2144 aaKnown RBP10.98□□□□□ -0.65
CPNE1-201ENST00000317677 EHFQ9NZC4 300 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 Q9UFV3 132 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 FZR1Q9UM11 496 aa10.98□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A10PA6NDY2 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A18PA6NE21 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A16PA6NEW6 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A20PA6NIJ5 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A8PA6NJQ4 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A7PA6NKC0 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A22PA8MWA6 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A12PA8MX19 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A5PA8MXJ8 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A23PA8MXZ1 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TRAPPC2LH3BP13 241 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF205O95201 554 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A15PP0C7V4 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A13PP0C7W8 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A14PP0C7W9 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM90A24PP0C7X0 464 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 PI3P19957 117 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 DTYMKP23919 212 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 RAB7AP51149 207 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TAS2R46P59540 309 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TLE1Q04724 770 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF266Q14584 549 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 Q6ZR03 302 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 OR2G3Q8NGZ4 309 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ANXA10Q9UJ72 324 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 C14orf166Q9Y224 244 aaKnown RBP10.97□□□□□ -0.65
CPNE1-201ENST00000317677 IGHV3-64DA0A0J9YX35 117 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 LOC102723971A0A1B0GUV8 181 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 J3QT63 122 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF83P51522 516 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 FAM27E3Q08E93 113 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF154Q13106 437 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 GFRALQ6UXV0 394 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 ZNF66Q6ZN08 573 aa10.97□□□□□ -0.65
CPNE1-201ENST00000317677 TEX43Q6ZNM6 134 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms