RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
HNF4A-202ENST00000316673 CHIAQ9BZP6 476 aa12.6□□□□□ -0.39
HNF4A-202ENST00000316673 NMES1Q9C002 83 aa12.6□□□□□ -0.39
HNF4A-202ENST00000316673 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
HNF4A-202ENST00000316673 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
HNF4A-202ENST00000316673 A0A087X0M5 115 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 A0A1B0GX30 115 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 MEX3AA1L020 520 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TOR1AO14656 332 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 ST8SIA5O15466 376 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TNFSF12O43508 249 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 MMP9P14780 707 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 PRTN3P24158 256 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TAGLNQ01995 201 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SRSF4Q08170 494 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SCGB2A2Q13296 93 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 FAM71F2Q6NXP2 309 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SLC25A48Q6ZT89 311 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 NOXA1Q86UR1 476 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 OR51H1Q8NH63 302 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 OR9G1Q8NH87 305 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 RNASE11Q8TAA1 199 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 NANPQ8TBE9 248 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 GLYATL2Q8WU03 294 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 RBPMSQ93062 196 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 FYTTD1Q96QD9 318 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 AGMATQ9BSE5 352 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 PCGF1Q9BSM1 259 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 HEXA-AS1Q9H8Q6 139 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 CDC42EP3Q9UKI2 254 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SONP18583 2426 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 C13orf42A0A1B0GVH6 325 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 CDS2O95674 445 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 HOXB5P09067 269 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 IGHV1-8P0DP01 117 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 CCL3L1P16619 93 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 C4BPBP20851 252 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 DLX6P56179 175 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 BPIFB3P59826 476 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SP6Q3SY56 376 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 FAM120AOSQ5T036 256 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 THOC7Q6I9Y2 204 aaKnown RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 LYG1Q8N1E2 194 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 OR13D1Q8NGV5 346 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 OR10X1Q8NGY0 326 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TCTEX1D2Q8WW35 142 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TP53RKQ96S44 253 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 SDHAF2Q9NX18 166 aa12.59□□□□□ -0.39
HNF4A-202ENST00000316673 AMMECR1Q9Y4X0 333 aaPredicted RBP12.59□□□□□ -0.39
HNF4A-202ENST00000316673 MTORP42345 2549 aa12.58□□□□□ -0.39
HNF4A-202ENST00000316673 NAV3Q8IVL0 2385 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 BOLA2-SMG1P6H3BVE0 249 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 VDAC1P21796 283 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 THBS3P49746 956 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 VMO1Q7Z5L0 202 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 Q8N7P7 452 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 ZNF596Q8TC21 504 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 ABHD14BQ96IU4 210 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 C2orf50Q96LR7 162 aa12.58□□□□□ -0.4
HNF4A-202ENST00000316673 GSX1Q9H4S2 264 aaPredicted RBP12.58□□□□□ -0.4
HNF4A-202ENST00000316673 M0R1X1 148 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 IGLV2-14P01704 120 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 GNG10P50151 68 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 H2BFSP57053 126 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 SMCO1Q147U7 214 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 CT45A1Q5HYN5 189 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 GPR157Q5UAW9 335 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 C11orf42Q8N5U0 333 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 CT45A3Q8NHU0 189 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 THAP6Q8TBB0 222 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 RRNAD1Q96FB5 475 aaKnown RBP12.57□□□□□ -0.4
HNF4A-202ENST00000316673 TBX15Q96SF7 602 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 AIFM2Q9BRQ8 373 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 CLEC7AQ9BXN2 247 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 PARP12Q9H0J9 701 aaKnown RBP12.57□□□□□ -0.4
HNF4A-202ENST00000316673 IFI27L2Q9H2X8 130 aa12.57□□□□□ -0.4
HNF4A-202ENST00000316673 J3QR06 171 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 RBFOX2O43251 390 aaKnown RBP eCLIP12.56□□□□□ -0.41e-7■■■■□ 26.7
HNF4A-202ENST00000316673 RLN2P04090 185 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
HNF4A-202ENST00000316673 GGNBP1Q5YKI7 109 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 FAM219AQ8IW50 185 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 ABHD12Q8N2K0 398 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 LSM10Q969L4 123 aaKnown RBP12.56□□□□□ -0.4
HNF4A-202ENST00000316673 SIRT7Q9NRC8 400 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
HNF4A-202ENST00000316673 NSD1Q96L73 2696 aaPredicted RBP12.56□□□□□ -0.4
HNF4A-202ENST00000316673 CCSO14618 274 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 TXNL1O43396 289 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 SIX6O95475 246 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 AVPP01185 164 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 RRASP10301 218 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 SLC25A6P12236 298 aa12.55□□□□□ -0.4
HNF4A-202ENST00000316673 SRP14P37108 136 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms