RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LY6DQ14210 128 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 CT45A1Q5HYN5 189 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 IL34Q6ZMJ4 242 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 C1orf229Q6ZS94 237 aaPredicted RBP15.16■□□□□ 0.02
CCDC43-201ENST00000315286 STX12Q86Y82 276 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 C1orf87Q8N0U7 546 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 CT45A3Q8NHU0 189 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 MS4A5Q9H3V2 200 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 TMEM106BQ9NUM4 274 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 PPIAL4AQ9Y536 164 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 NKX6-3A6NJ46 265 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 FAM90A26D6RGX4 464 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 C1QL1O75973 258 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 NDUFB7P17568 137 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 NFYBP25208 207 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 ATP6V0CP27449 155 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 FHITP49789 147 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 UBE2KP61086 200 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 TNFRSF9Q07011 255 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 CORO2AQ92828 525 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 ABHD14AQ9BUJ0 271 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 CACFD1Q9UGQ2 172 aa15.16■□□□□ 0.02
CCDC43-201ENST00000315286 ZNF729A6NN14 1252 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 ITGB1BP1O14713 200 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 SIAH2O43255 324 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 FCGR3BO75015 233 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 MMP23AO75900 390 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 EFNB3Q15768 340 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 CD300LFQ8TDQ1 290 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 ZCCHC14Q8WYQ9 949 aaKnown RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 MS4A7Q9GZW8 240 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 RBKSQ9H477 322 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 LINC00574Q9H8X3 128 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 CISD1Q9NZ45 108 aaKnown RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 SLC25A10Q9UBX3 287 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 HSPB7Q9UBY9 170 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 LAMP3Q9UQV4 416 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 ABCA4P78363 2273 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 RAB29O14966 203 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 FCN3O75636 299 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 APOC3P02656 99 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 METTL15P1P0C7V9 234 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 F2RL1P55085 397 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 UNQ6494/PRO21346Q6UXR6 183 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 TMEM182Q6ZP80 229 aaPredicted RBP15.15■□□□□ 0.02
CCDC43-201ENST00000315286 H2BFWTQ7Z2G1 175 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 LYPD6BQ8NI32 183 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 ATP5SQ99766 215 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 PRORYQ9H606 182 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 IDI2-AS1Q9NZ38 188 aa15.15■□□□□ 0.02
CCDC43-201ENST00000315286 TPRP12270 2363 aaKnown RBP15.14■□□□□ 0.01
CCDC43-201ENST00000315286 TMEM218A2RU14 115 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 B9A039 149 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 RAB7AP51149 207 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 TAS2R30P59541 319 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 ARL16Q0P5N6 197 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 TMEM231Q9H6L2 316 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 ITPR1Q14643 2758 aa15.14■□□□□ 0.01
CCDC43-201ENST00000315286 hADV38S2A0JD32 116 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 MARCH11A6NNE9 402 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 AGPAT2O15120 278 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 ARHGDIBP52566 201 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 SPANXN5Q5MJ07 72 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 OR2G3Q8NGZ4 309 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 CA5BP1Q8WTZ4 195 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 R3HDM4Q96D70 268 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 C19orf12Q9NSK7 152 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 GAB2Q9UQC2 676 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 TNFRSF13BO14836 293 aaPredicted RBP15.13■□□□□ 0.01
CCDC43-201ENST00000315286 PRH1P02810 166 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 CAMLGP49069 296 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 RAB5CP51148 216 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 ERVFRD-1P60508 538 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 PRAMEF5Q5TYX0 476 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 LYPD2Q6UXB3 125 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 HAPLN4Q86UW8 402 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF439Q8NDP4 499 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 TSNAXQ99598 290 aaKnown RBP15.13■□□□□ 0.01
CCDC43-201ENST00000315286 FAM96BQ9Y3D0 163 aa15.13■□□□□ 0.01
CCDC43-201ENST00000315286 MED19A0JLT2 244 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-201ENST00000315286 HPRT1P00492 218 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 RUNX1Q01196 453 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF616Q08AN1 781 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF273Q14593 569 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 LINC00312Q9Y6C7 94 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 SAA2-SAA4A0A096LPE2 208 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 DFFBO76075 338 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 SAA2P0DJI9 122 aaPredicted RBP15.12■□□□□ 0.01
CCDC43-201ENST00000315286 GNG10P50151 68 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 RPL31P62899 125 aaKnown RBP15.12■□□□□ 0.01
CCDC43-201ENST00000315286 ZNF251Q9BRH9 671 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 TREM1Q9NP99 234 aa15.12■□□□□ 0.01
CCDC43-201ENST00000315286 STRAPQ9Y3F4 350 aaKnown RBP15.12■□□□□ 0.01
CCDC43-201ENST00000315286 LYG1Q8N1E2 194 aa15.11■□□□□ 0.01
CCDC43-201ENST00000315286 DDB2Q92466 427 aa15.11■□□□□ 0.01
CCDC43-201ENST00000315286 S1PR3Q99500 378 aa15.11■□□□□ 0.01
CCDC43-201ENST00000315286 RPUSD1Q9UJJ7 312 aaKnown RBP15.11■□□□□ 0.01
CCDC43-201ENST00000315286 TMA7Q9Y2S6 64 aaKnown RBP15.11■□□□□ 0.01
CCDC43-201ENST00000315286 PRELID3BQ9Y3B1 194 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms