RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 TMEM241Q24JQ0 296 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 ZNF680Q8NEM1 530 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 OR5P3Q8WZ94 311 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 PARD6AQ9NPB6 346 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 KLF4O43474 513 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 FAM157CP0CG43 387 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 MOGAT2Q3SYC2 334 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 DPH3Q96FX2 82 aa11.52□□□□□ -0.57
RFFL-201ENST00000315249 RHBDL1O75783 438 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 P2RY1P47900 373 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 IZUMO4Q1ZYL8 232 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 DNM1P46Q6ZS02 220 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 FAM216AQ8WUB2 273 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 AICDAQ9GZX7 198 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 NOTCH4Q99466 2003 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 LOC102723996A0A087X1L8 192 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 ZNF729A6NN14 1252 aaPredicted RBP11.51□□□□□ -0.57
RFFL-201ENST00000315249 MUC1P15941 1255 aaPredicted RBP11.51□□□□□ -0.57
RFFL-201ENST00000315249 NHLH1Q02575 133 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 C2CD4CQ8TF44 421 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 TRAPPC1Q9Y5R8 145 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 RD3LP0DJH9 198 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 PSG7Q13046 419 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 HSBP1O75506 76 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 IGKV1D-33P01593 117 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 IGKV1-33P01594 117 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 TMEM204Q9BSN7 226 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 ANAPC1Q9H1A4 1944 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 FAM216BQ8N7L0 139 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 KLK2P20151 261 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 KRTDAPP60985 99 aa11.51□□□□□ -0.57
RFFL-201ENST00000315249 RNASEKQ6P5S7 137 aaKnown RBP11.51□□□□□ -0.57
RFFL-201ENST00000315249 OR2A4O95047 310 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 P01737 135 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 ADRB1P08588 477 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 TCL1AP56279 114 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 OR2A7Q96R45 310 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 SPANXN1Q5VSR9 72 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 PAXXQ9BUH6 204 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 MRPS18CQ9Y3D5 142 aaKnown RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 KIF26AQ9ULI4 1882 aaPredicted RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 TMEM186Q96B77 213 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 NOL4LQ96MY1 436 aaPredicted RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 C11orf94C9JXX5 98 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 FABP4P15090 132 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 PEAR1Q5VY43 1037 aaPredicted RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 ACP7Q6ZNF0 438 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 LPAR5Q9H1C0 372 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 ZNF586Q9NXT0 402 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 OR2T8A6NH00 312 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 C1QTNF9BB2RNN3 333 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 C1QTNF9P0C862 333 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 ZNF735P0CB33 412 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 PMCHP20382 165 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 EEF1AKMT3Q96AZ1 226 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 NEUROG3Q9Y4Z2 214 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 C19orf67A6NJJ6 358 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 CRXO43186 299 aaPredicted RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 USF1P22415 310 aaPredicted RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 Q1RN00 199 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 QTRT1Q9BXR0 403 aaKnown RBP11.5□□□□□ -0.57
RFFL-201ENST00000315249 SRD5A3Q9H8P0 318 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 TMEM140Q9NV12 185 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 S4R3C0 116 aa11.5□□□□□ -0.57
RFFL-201ENST00000315249 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 TMEM56-RWDD3S4R434 201 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 IGKV1D-43A0A0B4J1Z2 117 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 CORTO00230 105 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 THBDP07204 575 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 CSN3P07498 182 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 G0S2P27469 103 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 IGHV3-49A0A0A0MS15 119 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 LRRC75BQ2VPJ9 315 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 MRPS18AQ9NVS2 196 aaKnown RBP11.49□□□□□ -0.57
RFFL-201ENST00000315249 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 FSTP19883 344 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 EWSR1Q01844 656 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFFL-201ENST00000315249 WDFY1Q8IWB7 410 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 U3KQ87 197 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 MYLKQ15746 1914 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
RFFL-201ENST00000315249 CD1BP29016 333 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 SPCS3P61009 180 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
RFFL-201ENST00000315249 ARPC4-TTLL3A0A0A6YYG9 625 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 JPT1Q9UK76 154 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 SAXO1Q8IYX7 474 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 NPIPB11E5RHQ5 1161 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
RFFL-201ENST00000315249 MRPL37Q9BZE1 423 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms