RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 LAMTOR2Q9Y2Q5 125 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 HYPMO75409 117 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 CD5P06127 495 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 LINC00869P0C866 280 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 TRGC1P0CF51 173 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 S100A4P26447 101 aaKnown RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 ID1P41134 155 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 LAIR2Q6ISS4 152 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF430Q9H8G1 570 aaPredicted RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 LHX9Q9NQ69 397 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 RNF7Q9UBF6 113 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 A0A1B0GTH9 108 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 SEC11AP67812 179 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 TCFL5Q9UL49 500 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM262E9PQX1 116 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 RPL8P62917 257 aaKnown RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 GBGT1Q8N5D6 347 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 CHCHD1Q96BP2 118 aaKnown RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 SLC25A22Q9H936 323 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 C9JCJ5 164 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 K7ESF4 209 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 MYOGP15173 224 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 PPOXP50336 477 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 LEMD1Q68G75 181 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 SHISA6Q6ZSJ9 500 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 ADAT3Q96EY9 351 aaPredicted RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 ITGB1BP1O14713 200 aa7.62□□□□□ -1.19
COL6A5-202ENST00000312481 MRPS18BQ9Y676 258 aaKnown RBP7.62□□□□□ -1.19
COL6A5-202ENST00000312481 RCC1P18754 421 aaPredicted RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 C2orf68Q2NKX9 166 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 TMEFF1Q8IYR6 380 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 CIARTQ8N365 385 aaPredicted RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 OR10AD1Q8NGE0 317 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 OR5A1Q8NGJ0 315 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 NDUFAF3Q9BU61 184 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 NRSN2Q9GZP1 204 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 C7orf71A4D174 169 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 MARCH11A6NNE9 402 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 LSM11P83369 360 aaKnown RBP eCLIP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 TMEM187Q14656 261 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 IBA57Q5T440 356 aaKnown RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 C16orf82Q7Z2V1 217 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 LRP4O75096 1905 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 A0A0G2JK05 382 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 A0A0U1RQS6 177 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 NKX2-6A6NCS4 301 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 TRGC2P03986 189 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 FOXN4Q96NZ1 517 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF205O95201 554 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 HBBP68871 147 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 CBLN3Q6UW01 205 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 DNM1P46Q6ZS02 220 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 C1orf210Q8IVY1 113 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 KCNS1Q96KK3 526 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 SOCS1O15524 211 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF250P15622 560 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 TNFAIP6P98066 277 aaPredicted RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 FUT5Q11128 374 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 SYT8Q8NBV8 401 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 PAXXQ9BUH6 204 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 TLNRD1Q9H1K6 362 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF257Q9Y2Q1 563 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 H0YL77 283 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 J3QR06 171 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 HOXA5P20719 270 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 HSPE1P61604 102 aaKnown RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 RNASEKQ6P5S7 137 aaKnown RBP7.61□□□□□ -1.19
COL6A5-202ENST00000312481 GLCCI1Q86VQ1 547 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 CBLN2Q8IUK8 224 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 WNT9BO14905 357 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 CT62P0C5K7 136 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 C8orf88P0DMB2 117 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 PI3P19957 117 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 CLEC1BQ9P126 229 aa7.61□□□□□ -1.19
COL6A5-202ENST00000312481 FOXS1O43638 330 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 IL11P20809 199 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 NCMAPQ5T1S8 102 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 OR51G1Q8NGK1 321 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 C1QTNF5Q9BXJ0 243 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 PTGER1P34995 402 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 RTN4RL2Q86UN3 420 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 HIGD1AQ9Y241 93 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 LHFPL6Q9Y693 200 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 METAP1P53582 386 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 CIRBPQ14011 172 aaKnown RBP7.6□□□□□ -1.19
COL6A5-202ENST00000312481 MBD3L1Q8WWY6 194 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 MS4A6AQ9H2W1 248 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF835Q9Y2P0 537 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 SPG11Q96JI7 2443 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 BMPR1BO00238 502 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 MRGPRFQ96AM1 343 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 ELOVL5Q9NYP7 299 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 OR2Z1Q8NG97 314 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 OR52M1Q8NGK5 317 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 ZNF501Q96CX3 271 aaPredicted RBP7.6□□□□□ -1.19
COL6A5-202ENST00000312481 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
COL6A5-202ENST00000312481 LAMTOR1Q6IAA8 161 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms