RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 C1orf229Q6ZS94 237 aaPredicted RBP13.74□□□□□ -0.21
CLCF1-201ENST00000312438 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 ZNF251Q9BRH9 671 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 CACNA1BQ00975 2339 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 TOR1AO14656 332 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
CLCF1-201ENST00000312438 P0C879 139 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 DLX6P56179 175 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 ZNF843Q8N446 348 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 OR8B3Q8NGG8 313 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 OR8B2Q96RD0 313 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 SLC25A31Q9H0C2 315 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 LYRM2Q9NU23 88 aaPredicted RBP13.73□□□□□ -0.21
CLCF1-201ENST00000312438 KALRNO60229 2985 aa13.73□□□□□ -0.21
CLCF1-201ENST00000312438 RAI1Q7Z5J4 1906 aaPredicted RBP13.72□□□□□ -0.21
CLCF1-201ENST00000312438 LINC00862A6NCI5 91 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 FAM90A26D6RGX4 464 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 THBS3P49746 956 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 CAV2P51636 162 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 H2BFWTQ7Z2G1 175 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 C8orf31Q8N9H6 132 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 DDB2Q92466 427 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 NEIL1Q96FI4 390 aaPredicted RBP13.72□□□□□ -0.21
CLCF1-201ENST00000312438 RAB40CQ96S21 281 aa13.72□□□□□ -0.21
CLCF1-201ENST00000312438 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.72□□□□□ -0.21
CLCF1-201ENST00000312438 A0A1W2PPH5 198 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 FAM24AA6NFZ4 105 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 SYNGR2O43760 224 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 JTBO76095 146 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 NXPH3O95157 252 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 GAPDHP04406 335 aaKnown RBP13.71□□□□□ -0.21
CLCF1-201ENST00000312438 S100A1P23297 94 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 SLC25A32Q9H2D1 315 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 FBXL17Q9UF56 701 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 TANC2Q9HCD6 1990 aa13.71□□□□□ -0.21
CLCF1-201ENST00000312438 A0A087X0M5 115 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 A0A1B0GX30 115 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 CDKN1AP38936 164 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 NHLH2Q02577 135 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 LINC00311Q8N616 119 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 TMEM252Q8N6L7 170 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 R3HDM4Q96D70 268 aa13.71□□□□□ -0.22
CLCF1-201ENST00000312438 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.22
CLCF1-201ENST00000312438 MARCH11A6NNE9 402 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 TMEM50AO95807 157 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 ARHGDIBP52566 201 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 EFNA4P52798 201 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 PAX9P55771 341 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 RPL23AP62750 156 aaKnown RBP13.7□□□□□ -0.22
CLCF1-201ENST00000312438 EWSR1Q01844 656 aaKnown RBP eCLIP13.7□□□□□ -0.22
CLCF1-201ENST00000312438 MIDNQ504T8 468 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 WDR25Q64LD2 544 aaPredicted RBP13.7□□□□□ -0.22
CLCF1-201ENST00000312438 RPL7L1Q6DKI1 246 aaKnown RBP13.7□□□□□ -0.22
CLCF1-201ENST00000312438 OR4S2Q8NH73 311 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 ZNF596Q8TC21 504 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 PCNPQ8WW12 178 aaKnown RBP13.7□□□□□ -0.22
CLCF1-201ENST00000312438 WSB1Q9Y6I7 421 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 ABCA4P78363 2273 aa13.7□□□□□ -0.22
CLCF1-201ENST00000312438 NMBP08949 121 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 NQO2P16083 231 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 C8orf46Q8TAG6 207 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 SMIM3Q9BZL3 60 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 PATZ1Q9HBE1 687 aaKnown RBP13.69□□□□□ -0.22
CLCF1-201ENST00000312438 IGSF10Q6WRI0 2623 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 PPIAL4CA0A0B4J2A2 164 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 FAM90A9PA6NNJ1 464 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 J3QR06 171 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 MED6O75586 246 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 PPIAL4GP0DN37 164 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 TAS2R30P59541 319 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 UBE2KP61086 200 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 ERVK-16P61578 105 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 EIF5AL1Q6IS14 154 aaKnown RBP13.69□□□□□ -0.22
CLCF1-201ENST00000312438 ZNF833PQ6ZTB9 187 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 PDZD9Q8IXQ8 264 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 ZNF383Q8NA42 475 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 OR9G1Q8NH87 305 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 BSCL2Q96G97 398 aaPredicted RBP13.69□□□□□ -0.22
CLCF1-201ENST00000312438 SMIM8Q96KF7 97 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 SPOCK3Q9BQ16 436 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 HSPB7Q9UBY9 170 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 SESN1Q9Y6P5 492 aa13.69□□□□□ -0.22
CLCF1-201ENST00000312438 USP24Q9UPU5 2620 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 BORCS7-ASMTA0A0B4J1R7 106 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 IGSF23A1L1A6 192 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 CT45A6P0DMU7 189 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 CT45A5P0DMU8 189 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 CT45A7P0DMV0 189 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 TNFRSF9Q07011 255 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 BAXQ07812 192 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 ABHD12Q8N2K0 398 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 UBAC2Q8NBM4 344 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 TMEM186Q96B77 213 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 TMEM133Q9H2Q1 129 aa13.68□□□□□ -0.22
CLCF1-201ENST00000312438 OVOL3O00110 214 aa13.67□□□□□ -0.22
CLCF1-201ENST00000312438 RBP4P02753 201 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms